Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.3e-124 449.9 250 100.0
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 3.1e-54 216.1 249 58.6
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 5.9e-53 211.8 255 50.2
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 5.5e-51 205.3 255 53.3
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 2.5e-48 196.4 182 59.3
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.5e-45 187.2 255 54.1
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 6.1e-42 175.3 181 55.8
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 1.4e-41 174.1 186 52.7
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 3.0e-41 172.9 181 51.9
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 6.7e-41 171.8 183 51.9
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 6.7e-41 171.8 238 52.1
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 3.3e-40 169.5 183 51.4
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 1.7e-39 167.2 186 50.5
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.7e-39 167.2 182 51.6
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 2.0e-37 160.2 186 49.5
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 2.6e-37 159.8 186 51.1
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.0e-36 157.9 154 53.9
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 5.0e-36 155.6 175 50.9
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 1.1e-35 154.5 184 48.9
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.4e-35 154.1 180 51.1
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 4.2e-35 152.5 188 47.9
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 4.2e-35 152.5 181 48.1
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 9.4e-35 151.4 181 48.1
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 1.2e-34 151.0 181 47.5
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.2e-34 151.0 183 48.6
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 1.2e-34 151.0 184 47.3
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 1.6e-34 150.6 182 47.8
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 2.1e-34 150.2 185 48.6
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 6.1e-34 148.7 241 47.3
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 6.1e-34 148.7 184 44.6
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 1.4e-33 147.5 184 47.8
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 1.8e-33 147.1 184 47.8
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 1.8e-33 147.1 184 47.8
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.2e-33 145.6 241 46.9
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 2.0e-32 143.7 152 52.0
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 2.6e-32 143.3 185 45.4
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 2.6e-32 143.3 151 53.6
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 4.4e-32 142.5 184 42.9
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 4.4e-32 142.5 181 43.1
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 7.4e-32 141.7 180 48.9
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.7e-32 141.4 179 48.0
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 9.7e-32 141.4 180 47.2
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 9.7e-32 141.4 184 45.1
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 1.3e-31 141.0 180 47.2
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 1.7e-31 140.6 181 44.2
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.8e-31 139.8 179 47.5
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 3.7e-31 139.4 163 50.3
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 6.3e-31 138.7 180 45.6
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 8.2e-31 138.3 183 44.3
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 1.1e-30 137.9 191 42.4
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 3.1e-30 136.3 185 45.4
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 7.0e-30 135.2 192 41.1
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 7.0e-30 135.2 185 45.4
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.2e-29 134.4 181 43.6
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 2.0e-29 133.7 174 46.0
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 3.5e-29 132.9 191 41.9
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.5e-29 132.9 241 45.2
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 4.5e-29 132.5 181 40.9
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.9e-29 132.1 185 44.3
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 7.7e-29 131.7 152 49.3
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.0e-28 131.3 178 46.1
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 1.0e-28 131.3 238 45.0
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 1.0e-28 131.3 238 45.0
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 1.7e-28 130.6 183 42.1
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.2e-28 130.2 241 43.6
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 2.2e-28 130.2 152 48.7
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 5.0e-28 129.0 152 48.0
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 8.5e-28 128.3 177 44.6
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 2.5e-27 126.7 175 42.3
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 5.5e-27 125.6 153 45.1
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.2e-26 124.4 175 40.6
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 1.2e-26 124.4 156 46.2
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 1.6e-26 124.0 183 40.4
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 1.8e-25 120.6 188 39.9
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.0e-25 119.8 161 46.0
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 4.0e-25 119.4 155 46.5
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 4.0e-25 119.4 122 55.7
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 5.2e-25 119.0 181 37.6
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 5.2e-25 119.0 181 37.6
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 8.8e-25 118.2 176 39.8
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 8.8e-25 118.2 179 40.8
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.2e-24 117.9 184 38.6
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.5e-24 117.5 184 38.0
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 1.7e-23 114.0 187 40.1
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 2.8e-23 113.2 275 30.9
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 8.2e-23 111.7 121 52.1
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 3.1e-22 109.8 178 41.0
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 4.1e-22 109.4 184 36.4
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 5.3e-22 109.0 132 44.7
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 5.3e-22 109.0 183 37.7
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 7.0e-22 108.6 152 42.8
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.6e-21 107.5 152 38.8
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 5.9e-21 105.5 132 43.9
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.0e-20 104.8 103 51.5
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 1.0e-20 104.8 178 37.6
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 2.2e-20 103.6 121 45.5
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 6.5e-20 102.1 209 35.9
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 8.5e-20 101.7 159 41.5
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 8.5e-20 101.7 156 41.7
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.5e-20 101.7 156 41.7
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.5e-20 101.7 156 41.0
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.1e-19 101.3 120 47.5
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.2e-19 99.8 156 41.0
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 1.2e-18 97.8 137 46.0
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.1e-18 97.1 63 73.0
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 1.0e-17 94.7 108 49.1
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 5.2e-17 92.4 133 41.4
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 4.8e-15 85.9 73 49.3
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 8.3e-15 85.1 61 60.7
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 1.6e-13 80.9 59 57.6
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 5.9e-13 79.0 56 58.9
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 5.9e-13 79.0 153 34.6
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 1.3e-12 77.8 113 38.9
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 5.0e-12 75.9 163 32.5
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 6.5e-12 75.5 163 32.5
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 2.5e-11 73.6 163 31.9
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 2.5e-11 73.6 163 31.9
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 2.5e-11 73.6 163 31.9
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.8e-10 70.1 79 43.0
Ca_19036_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.6e-10 69.7 117 55.6
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 5.7e-08 62.4 166 28.3
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.3e-07 61.2 176 35.2
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 6.3e-07 58.9 167 29.9


User provided reference genes

Program Settings