Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16094_v3 Cicer arietinum L. HOM05D005797 ORTHO05D006479 4.5e-247 857.4 425 100.0
TPR.G26145 Trifolium pratense HOM05D005797 ORTHO05D006479 9.2e-107 391.3 638 42.2
Psat5g141720 Pisum sativum HOM05D005797 ORTHO05D006479 1.6e-98 364.0 495 48.3
Glyma.04G192400 Glycine max HOM05D005797 ORTHO05D006479 1.4e-83 314.3 555 40.2
Lalb_Chr23g0273471 Lupinus albus HOM05D005797 ORTHO05D006479 2.0e-53 214.2 597 31.7
Phvul.009G169300 Phaseolus vulgaris HOM05D005797 ORTHO05D006479 2.9e-52 210.3 493 36.1
VMungo1309G1346 Vigna mungo HOM05D005797 ORTHO05D006479 5.6e-48 196.1 491 34.2
Medtr3g075140 Medicago truncatula HOM05D005797 ORTHO05D006479 9.0e-38 162.2 169 52.7
arahy.Tifrunner.gnm1.ann1.7Y7E6F Arachis hypogaea HOM05D005797 ORTHO05D006479 2.1e-34 151.0 533 28.9
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 1.3e-31 141.7 522 29.7
MELO3C002331.2 Cucumis melo HOM05D005797 ORTHO05D006479 9.1e-30 135.6 511 27.0
CsaV3_1G009280 Cucumis sativus L. HOM05D005797 ORTHO05D006479 1.3e-28 131.7 520 26.0
CSS0028554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 7.2e-27 125.9 488 27.0
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 7.2e-27 125.9 493 29.0
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 1.2e-26 125.2 467 27.4
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 2.7e-26 124.0 516 27.1
Sed0007512 Sechium edule HOM05D005797 ORTHO05D006479 2.3e-25 120.9 532 26.1
CiPaw.11G012700 Carya illinoinensis HOM05D005797 ORTHO05D006479 2.6e-24 117.5 520 27.1
arahy.Tifrunner.gnm1.ann1.NX8KLK Arachis hypogaea HOM05D005797 ORTHO05D006479 3.3e-24 117.1 496 28.6
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 1.7e-23 114.8 457 26.3
TAR629G0979 Trochodendron aralioides HOM05D005797 ORTHO05D006479 2.2e-23 114.4 506 27.5
Rhsim01G0114700 Rhododendron simsii HOM05D005797 ORTHO05D006479 4.8e-23 113.2 492 26.4
CSS0032554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 6.3e-23 112.8 494 26.5
CSS0021207 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.1e-22 112.1 495 26.5
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 2.4e-22 110.9 451 26.6
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 7.0e-22 109.4 524 27.7
Nn3g16589 Nelumbo nucifera HOM05D005797 ORTHO05D006479 3.5e-21 107.1 527 25.2
PGR044G0013 Punica granatum HOM05D005797 ORTHO05D006479 7.7e-21 105.9 471 24.8
Hund18537 Selenicereus undatus HOM05D005797 ORTHO05D006479 8.5e-20 102.4 463 26.8
Nn4g22471 Nelumbo nucifera HOM05D005797 ORTHO05D006479 1.9e-19 101.3 538 23.8
Nitab4.5_0010931g0020 Nicotiana tabacum HOM05D005797 ORTHO05D006479 4.2e-19 100.1 438 24.9
Nitab4.5_0002062g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 7.2e-19 99.4 438 25.6
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 1.2e-18 98.6 562 23.8
QL05p054837 Quercus lobata HOM05D005797 ORTHO05D006479 4.7e-18 96.7 92 54.3
Solyc03g007140.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 4.7e-18 96.7 443 23.5
Lj5A100T65 Lonicera japonica HOM05D005797 ORTHO05D006479 6.1e-18 96.3 553 26.0
AUR62001271 Chenopodium quinoa HOM05D005797 ORTHO05D006479 1.8e-17 94.7 452 25.4
PGSC0003DMG400031024 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.8e-17 94.7 443 24.2
CSS0013181 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.3e-17 94.4 97 52.6
Sc10g0010330 Simmondsia chinensis HOM05D005797 ORTHO05D006479 5.2e-17 93.2 545 25.0
Atru.chr9.1003 Acer truncatum HOM05D005797 ORTHO05D006479 2.6e-16 90.9 98 48.0
Sopen03g003130 Solanum pennellii HOM05D005797 ORTHO05D006479 2.6e-16 90.9 443 23.5
CDE09G0812 Ceratophyllum demersum HOM05D005797 ORTHO05D006479 5.7e-16 89.7 532 22.0
Potri.012G093200 Populus trichocarpa HOM05D005797 ORTHO05D006479 1.3e-15 88.6 76 53.9
Nitab4.5_0010042g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.7e-15 88.2 450 24.2
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 4.8e-15 86.7 131 40.5
CAN.G1022.3 Capsicum annuum HOM05D005797 ORTHO05D006479 1.1e-14 85.5 452 24.1
Sabra12G0067900 Salix brachista HOM05D005797 ORTHO05D006479 2.4e-14 84.3 72 54.2
Ciclev10019558m.g Citrus clementina HOM05D005797 ORTHO05D006479 5.3e-14 83.2 102 46.1
Hund05629 Selenicereus undatus HOM05D005797 ORTHO05D006479 5.3e-14 83.2 491 24.0
Nitab4.5_0003282g0040 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.2e-13 82.0 482 22.8
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 1.2e-13 82.0 516 24.4
Actinidia19380 Actinidia chinensis HOM05D005797 ORTHO05D006479 1.6e-13 81.6 94 47.9
Nn3g16591 Nelumbo nucifera HOM05D005797 ORTHO05D006479 7.7e-13 79.3 93 47.3
PGSC0003DMG401015175 Solanum tuberosum HOM05D005797 ORTHO05D006479 2.2e-12 77.8 462 21.4
Hund05637 Selenicereus undatus HOM05D005797 ORTHO05D006479 5.0e-12 76.6 105 39.0
Peaxi162Scf00536g00111 Petunia axillaris HOM05D005797 ORTHO05D006479 6.5e-12 76.3 111 41.4
RcHm_v2.0_Chr2g0149281 Rosa chinensis HOM05D005797 ORTHO05D006479 6.5e-12 76.3 141 35.5
RcHm_v2.0_Chr7g0191351 Rosa chinensis HOM05D005797 ORTHO05D006479 8.5e-12 75.9 139 38.1
TWI39G1083 Tripterygium wilfordii HOM05D005797 ORTHO05D006479 8.5e-12 75.9 93 41.9
FAN04G0892 Fragaria x ananassa HOM05D005797 ORTHO05D006479 1.1e-11 75.5 70 51.4
HPP92_021432 Vanilla planifolia HOM05D022286 ORTHO05D006479 1.1e-11 75.5 522 21.8
PGSC0003DMG400031023 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.5e-11 75.1 425 21.9
FAN13G0931 Fragaria x ananassa HOM05D005797 ORTHO05D006479 1.9e-11 74.7 70 51.4
Prupe.5G155300 Prunus persica HOM05D005797 ORTHO05D006479 1.9e-11 74.7 97 45.4
CAN.G472.30 Capsicum annuum HOM05D005797 ORTHO05D006479 2.5e-11 74.3 548 21.2
CAN.G769.1 Capsicum annuum HOM05D005797 ORTHO05D006479 2.5e-11 74.3 447 21.5
FAN08G2881 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.5e-11 74.3 70 50.0
AUR62025735 Chenopodium quinoa HOM05D005797 ORTHO05D006479 4.2e-11 73.6 536 22.6
Hund05636 Selenicereus undatus HOM05D005797 ORTHO05D006479 4.2e-11 73.6 105 38.1
CAN.G1022.5 Capsicum annuum HOM05D005797 ORTHO05D006479 7.2e-11 72.8 88 44.3
Peaxi162Scf00089g00723 Petunia axillaris HOM05D005797 ORTHO05D006479 9.4e-11 72.4 474 21.3
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.6e-10 71.6 78 43.6
FvH4_5g07280 Fragaria vesca HOM05D005797 ORTHO05D006479 2.1e-10 71.2 70 48.6
FAN18G3318 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.1e-10 71.2 70 48.6
DCAR_005590 Daucus carota HOM05D001479 ORTHO05D006479 2.7e-10 70.9 88 46.6
DCAR_007694 Daucus carota HOM05D005797 ORTHO05D006479 2.7e-10 70.9 467 21.8
SalBow1G3539 Salvia bowleyana HOM05D005797 ORTHO05D006479 2.7e-10 70.9 166 33.1
Solyc03g111500.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 4.7e-10 70.1 455 21.3
PGSC0003DMG400037834 Solanum tuberosum HOM05D005797 ORTHO05D006479 6.1e-10 69.7 83 39.8
Aqoxy3G01381 Aquilegia oxysepala HOM05D005797 ORTHO05D006479 8.0e-10 69.3 575 21.7
Cc04_g10490 Coffea canephora HOM05D005797 ORTHO05D006479 8.0e-10 69.3 94 41.5
Solyc10g053890.2 Solanum lycopersicum HOM05D005797 ORTHO05D006479 1.0e-09 68.9 82 41.5
Hund05642 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.4e-09 68.6 105 36.2
Ciclev10023279m.g Citrus clementina HOM05D005797 ORTHO05D006479 1.8e-09 68.2 71 53.5
Os02g0598200 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 4.0e-09 67.0 87 40.2
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 5.2e-09 66.6 449 21.4
PGSC0003DMG400044028 Solanum tuberosum HOM05D005797 ORTHO05D006479 6.8e-09 66.2 87 36.8
MSTRG.9312 Avicennia marina HOM05D005797 ORTHO05D006479 8.8e-09 65.9 128 34.4
CANSAT80G2591 Cannabis sativa HOM05D005797 ORTHO05D006479 8.8e-09 65.9 296 24.0
Oeu011579.3 Olea europaea HOM05D005797 ORTHO05D006479 8.8e-09 65.9 75 44.0
unitig_699.g19758 Utricularia gibba HOM05D005797 ORTHO05D006479 8.8e-09 65.9 75 44.0
PGSC0003DMG400046794 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.2e-08 65.5 85 37.6
HPP92_027093 Vanilla planifolia HOM05D022286 ORTHO05D006479 1.2e-08 65.5 189 29.6
EL10Ac7g18067 Beta vulgaris HOM05D005797 ORTHO05D006479 2.0e-08 64.7 396 23.0
PGSC0003DMG400034759 Solanum tuberosum HOM05D005797 ORTHO05D006479 2.6e-08 64.3 87 36.8
Migut.O00498 Erythranthe guttata HOM05D005797 ORTHO05D006479 3.4e-08 63.9 101 36.6
MBI11_g20093_MAGBIO Magnolia biondii HOM05D005797 ORTHO05D006479 4.4e-08 63.5 67 46.3
PGSC0003DMG400046008 Solanum tuberosum HOM05D005797 ORTHO05D006479 4.4e-08 63.5 85 36.5
PGSC0003DMG400035342 Solanum tuberosum HOM05D005797 ORTHO05D006479 5.7e-08 63.2 74 41.9
CSS0048062 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.7e-07 61.6 67 46.3
Lsat_1_v5_gn_4_78921 Lactuca sativa HOM05D005797 ORTHO05D006479 1.7e-07 61.6 78 43.6
EL10Ac7g18068 Beta vulgaris HOM05D005797 ORTHO05D006479 2.2e-07 61.2 137 32.8
PSO063G1422 Papaver somniferum HOM05D005797 ORTHO05D006479 2.8e-07 60.8 95 33.7
CAN.G352.1 Capsicum annuum HOM05D005797 ORTHO05D006479 3.7e-07 60.5 114 34.2
PSO478G0449 Papaver somniferum HOM05D005797 ORTHO05D006479 3.7e-07 60.5 66 42.4
ECA232G3585 Erigeron canadensis HOM05D005797 ORTHO05D006479 6.3e-07 59.7 76 43.4
EL10Ac3g05993 Beta vulgaris HOM05D000888 ORTHO05D000740 8.3e-07 59.3 67 40.3
Actinidia36524 Actinidia chinensis HOM05D001349 ORTHO05D001980 1.4e-06 58.5 72 36.1
CAN.G760.5 Capsicum annuum HOM05D005797 ORTHO05D006479 1.4e-06 58.5 53 50.9
FAN20G0318 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.4e-06 58.5 74 44.6
Os01g0905400 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 1.4e-06 58.5 104 32.7
SalBow1G5187 Salvia bowleyana HOM05D005797 ORTHO05D000088 1.4e-06 58.5 74 40.5
MELO3C018249.2 Cucumis melo HOM05D000823 ORTHO05D000088 1.8e-06 58.2 70 32.9
SGA_v2.0_scaffold172G39027 Striga asiatica HOM05D005797 ORTHO05D006479 1.8e-06 58.2 113 32.7
Thecc.01G047300 Theobroma cacao HOM05D000823 ORTHO05D000088 3.1e-06 57.4 85 38.8
FAN27G1379 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.1e-06 57.0 74 44.6
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 5.3e-06 56.6 81 38.3
FAN15G3412 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.3e-06 56.6 74 44.6
CAN.G472.29 Capsicum annuum HOM05D005797 ORTHO05D006479 7.0e-06 56.2 56 50.0
Nn5g29401 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.0e-06 56.2 69 42.0
HanXRQChr16g0497931 Helianthus annuus HOM05D005797 ORTHO05D006479 9.1e-06 55.8 68 42.6
SalBow6G5296 Salvia bowleyana HOM05D005797 ORTHO05D000088 9.1e-06 55.8 69 40.6
SalBow6G5938 Salvia bowleyana HOM05D005797 ORTHO05D000088 9.1e-06 55.8 69 40.6


User provided reference genes

Program Settings