Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 1.5e-81 306.2 169 100.0
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 1.1e-47 193.7 165 72.1
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 1.6e-46 189.9 167 73.1
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 1.4e-45 186.8 170 69.4
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 1.2e-44 183.7 167 67.1
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 4.8e-43 178.3 162 67.3
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 7.0e-42 174.5 160 70.6
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 6.6e-40 167.9 167 64.7
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 1.0e-37 160.6 170 62.9
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 1.4e-37 160.2 174 63.2
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 3.0e-37 159.1 166 64.5
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 6.8e-37 157.9 177 62.1
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 1.0e-32 144.1 169 58.6
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 5.0e-32 141.7 180 56.1
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 6.6e-32 141.4 172 57.0
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 1.1e-31 140.6 175 58.3
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.5e-31 140.2 179 54.7
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 9.5e-31 137.5 183 56.8
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 1.0e-29 134.0 164 56.7
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 3.1e-29 132.5 177 53.7
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 4.0e-29 132.1 190 54.2
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 5.2e-29 131.7 174 56.9
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 6.8e-29 131.3 183 55.7
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 1.2e-28 130.6 178 55.1
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 3.4e-28 129.0 175 55.4
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 5.8e-28 128.3 176 56.2
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 2.2e-27 126.3 194 49.0
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 2.9e-27 125.9 174 55.2
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 3.7e-27 125.6 123 64.2
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 1.1e-26 124.0 155 57.4
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 1.1e-26 124.0 176 56.2
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 1.4e-26 123.6 177 52.5
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 2.4e-26 122.9 171 52.0
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 9.2e-26 120.9 177 54.2
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 9.2e-26 120.9 186 51.1
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.6e-25 120.2 177 52.5
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 2.0e-25 119.8 178 53.4
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 1.3e-24 117.1 174 54.0
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.3e-24 117.1 177 52.0
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 2.3e-24 116.3 180 53.9
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 3.9e-24 115.5 175 49.7
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 5.0e-24 115.2 172 54.7
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 5.0e-24 115.2 173 49.1
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 3.3e-23 112.5 172 52.9
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 4.3e-23 112.1 169 52.1
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 7.3e-23 111.3 178 53.4
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 7.3e-23 111.3 175 51.4
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 9.5e-23 110.9 179 52.0
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 1.6e-22 110.2 191 48.7
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 1.6e-22 110.2 175 50.3
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 2.1e-22 109.8 177 52.0
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 2.8e-22 109.4 177 51.4
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 8.0e-22 107.8 172 50.0
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 1.1e-21 107.5 181 50.3
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.4e-21 107.1 178 51.1
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 1.8e-21 106.7 179 51.4
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.8e-21 106.7 177 52.0
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 1.8e-21 106.7 179 51.4
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.8e-21 106.7 179 51.4
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 1.8e-21 106.7 187 47.6
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 2.3e-21 106.3 188 45.2
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 1.2e-20 104.0 169 52.7
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 1.5e-20 103.6 177 48.6
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 5.8e-20 101.7 164 49.4
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 3.7e-19 99.0 208 45.7
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.7e-19 99.0 164 49.4
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 1.4e-18 97.1 188 45.7
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 1.9e-18 96.7 169 49.7
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 2.4e-18 96.3 183 47.5
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 3.2e-18 95.9 161 47.2
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 4.1e-18 95.5 188 47.9
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 5.4e-18 95.1 184 46.2
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 7.0e-18 94.7 145 50.3
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 1.2e-17 94.0 167 49.1
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 2.1e-17 93.2 183 48.6
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 2.1e-17 93.2 185 46.5
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 2.7e-17 92.8 169 48.5
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 4.6e-17 92.0 188 47.9
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 7.8e-17 91.3 164 47.6
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 1.3e-16 90.5 160 47.5
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 1.7e-16 90.1 189 45.0
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 1.7e-16 90.1 166 48.2
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 3.0e-16 89.4 171 48.5
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 5.1e-16 88.6 232 38.4
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 8.6e-16 87.8 169 46.2
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 1.1e-15 87.4 126 53.2
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 4.3e-15 85.5 176 46.0
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 7.3e-15 84.7 161 45.3
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 9.5e-15 84.3 196 41.8
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 1.6e-14 83.6 176 45.5
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 2.8e-14 82.8 167 46.1
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 3.6e-14 82.4 160 45.0
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 1.1e-13 80.9 171 44.4
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 1.1e-13 80.9 200 41.5
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 1.4e-13 80.5 165 46.7
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 1.8e-13 80.1 199 40.7
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 1.8e-13 80.1 166 47.0
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 3.1e-13 79.3 166 47.6
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 3.1e-13 79.3 201 40.8
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 6.8e-13 78.2 192 42.2
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 8.9e-13 77.8 164 43.9
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 1.2e-12 77.4 88 59.1
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 1.2e-12 77.4 139 51.1
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 1.2e-12 77.4 165 44.2
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 1.5e-12 77.0 176 43.2
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 2.0e-12 76.6 146 50.7
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 5.8e-12 75.1 230 37.4
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 5.8e-12 75.1 178 42.1
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 1.3e-11 73.9 111 50.5
Oeu023474.2 Olea europaea HOM05D005518 ORTHO05D001269 3.7e-11 72.4 157 45.9
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 1.1e-10 70.9 165 43.6
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 1.4e-10 70.5 172 43.0
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 2.4e-10 69.7 142 43.0
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 4.1e-10 68.9 170 43.5
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 7.1e-10 68.2 149 40.9
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 2.1e-09 66.6 122 47.5
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 2.1e-09 66.6 122 47.5
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 7.8e-09 64.7 122 46.7
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 7.8e-09 64.7 166 44.0
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 7.8e-09 64.7 166 44.0
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 1.0e-08 64.3 181 43.6
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 1.7e-08 63.5 167 43.1
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 5.6e-07 58.5 146 40.4
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 6.2e-06 55.1 117 44.4


User provided reference genes

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