Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 5.5e-133 477.6 240 100.0
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 3.1e-104 382.1 233 82.4
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.7e-102 376.3 234 81.6
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 2.3e-99 365.9 240 76.2
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 3.4e-98 362.1 219 81.3
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 6.3e-97 357.8 236 77.5
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 3.3e-93 345.5 218 78.9
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 3.3e-93 345.5 218 78.9
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 2.1e-92 342.8 214 78.0
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.3e-86 322.8 234 69.7
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 4.7e-84 315.1 235 69.4
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.7e-81 306.6 218 69.3
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 8.3e-81 304.3 231 67.5
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 2.4e-80 302.8 179 83.2
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 3.2e-80 302.4 192 78.1
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 3.9e-78 295.4 217 68.2
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 7.3e-77 291.2 234 65.0
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 9.5e-77 290.8 231 65.4
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 4.7e-76 288.5 233 65.7
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 1.1e-75 287.3 221 67.9
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 3.1e-75 285.8 226 67.3
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 3.1e-75 285.8 218 65.1
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 5.2e-75 285.0 217 65.0
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 6.8e-75 284.6 191 75.9
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 2.0e-74 283.1 229 64.2
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 2.6e-74 282.7 270 55.9
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 4.4e-74 282.0 275 54.9
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 5.8e-74 281.6 226 66.8
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 9.8e-74 280.8 241 62.7
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 1.3e-73 280.4 230 60.9
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 6.4e-73 278.1 226 63.3
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.4e-72 276.9 247 59.1
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.1e-72 274.6 223 62.8
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.2e-71 273.9 220 62.3
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.2e-71 273.9 220 62.3
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 6.0e-71 271.6 228 62.3
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.8e-71 271.2 219 61.6
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 3.0e-70 269.2 231 61.9
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 3.3e-69 265.8 241 58.1
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 3.3e-69 265.8 229 61.1
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.0e-67 258.8 222 61.3
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.4e-66 255.4 231 58.0
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 7.6e-66 254.6 217 61.3
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.7e-65 253.4 191 67.5
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 8.4e-65 251.1 186 68.8
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 5.1e-62 241.9 236 54.2
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.9e-61 240.0 228 55.3
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 4.3e-61 238.8 151 74.2
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 4.3e-61 238.8 228 54.8
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 4.3e-61 238.8 206 59.2
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 4.3e-61 238.8 228 55.7
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 5.6e-61 238.4 228 54.4
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 7.3e-61 238.0 209 55.5
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.1e-60 236.5 231 58.4
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 2.8e-60 236.1 237 52.7
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.4e-59 233.8 228 57.5
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 8.9e-59 231.1 230 53.5
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 8.9e-59 231.1 230 53.5
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 8.9e-59 231.1 230 53.5
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.5e-58 230.3 254 49.6
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 4.4e-58 228.8 239 51.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 5.8e-58 228.4 205 57.1
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 5.8e-58 228.4 220 54.1
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 9.9e-58 227.6 225 53.8
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.9e-58 227.6 227 52.4
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.3e-57 227.3 231 51.5
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.3e-57 227.3 231 51.5
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.7e-57 226.9 225 53.3
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.7e-57 226.9 225 53.3
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 6.4e-57 224.9 233 51.9
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.5e-53 213.8 250 46.4
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.5e-53 213.0 203 54.2
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.6e-53 211.8 203 54.2
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 9.6e-53 211.1 227 50.7
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.6e-52 210.3 152 65.1
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 5.3e-51 205.3 212 51.9
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 9.9e-50 201.1 155 63.2
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 3.8e-49 199.1 170 60.6
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 9.3e-48 194.5 225 51.1
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 6.0e-47 191.8 209 49.8
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 1.8e-46 190.3 156 62.2
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 5.1e-46 188.7 217 49.3
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.5e-45 186.4 127 68.5
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.6e-44 183.7 218 47.7
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 1.2e-42 177.6 229 46.3
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.2e-42 177.6 153 54.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 9.9e-42 174.5 146 59.6
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.2e-40 169.5 313 34.8
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.2e-39 167.5 142 64.1
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 2.1e-39 166.8 142 63.4
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 2.7e-39 166.4 255 38.8
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 7.9e-39 164.9 142 63.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 2.3e-38 163.3 145 60.7
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 3.0e-38 162.9 258 36.4
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.9e-38 162.5 198 44.4
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.5e-37 159.8 151 55.6
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 3.3e-37 159.5 144 60.4
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 4.3e-37 159.1 139 59.0
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 7.4e-37 158.3 275 34.2
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.6e-36 157.1 140 60.7
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.1e-36 156.8 139 58.3
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 2.8e-36 156.4 139 58.3
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 3.7e-36 156.0 159 54.1
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 4.8e-36 155.6 220 43.2
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.2e-36 155.2 141 57.4
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.5e-34 150.6 224 37.9
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 5.8e-34 148.7 138 55.1
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 2.2e-33 146.7 137 57.7
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.5e-32 143.3 149 54.4
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 7.1e-32 141.7 151 55.0
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 5.1e-30 135.6 222 37.4
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 2.2e-28 130.2 88 73.9
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.1e-27 125.9 146 46.6
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 2.2e-25 120.2 260 32.3
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 7.9e-23 111.7 69 69.6
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 1.1e-21 107.8 148 46.6
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.9e-21 107.1 81 51.9
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 3.1e-11 73.2 73 43.8
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.3e-09 67.8 72 45.8
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 2.5e-08 63.5 79 40.5


User provided reference genes

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