Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 3.8e-115 418.3 229 100.0
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.1e-98 363.6 219 90.9
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 9.3e-98 360.5 219 88.6
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 5.3e-93 344.7 219 84.9
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 6.1e-81 304.7 216 78.2
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 8.2e-70 267.7 219 72.1
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.1e-69 265.4 219 71.7
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.0e-64 250.8 218 67.9
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 8.8e-64 247.7 209 66.0
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.2e-63 247.3 219 66.7
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 4.5e-60 235.3 210 63.8
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 4.5e-60 235.3 221 62.0
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 6.5e-59 231.5 208 64.9
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 8.5e-59 231.1 208 64.9
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 1.2e-57 227.3 208 64.4
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 1.6e-57 226.9 208 63.5
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.7e-57 226.1 212 59.9
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 3.6e-57 225.7 224 59.8
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 3.6e-57 225.7 210 62.4
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 8.0e-57 224.6 209 64.1
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 4.0e-56 222.2 214 61.7
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 8.8e-56 221.1 209 61.7
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 8.8e-56 221.1 212 59.0
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 8.8e-56 221.1 209 61.7
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 1.2e-55 220.7 211 58.8
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.7e-55 218.4 210 61.0
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 5.7e-55 218.4 220 55.9
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 7.5e-55 218.0 210 61.4
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.3e-54 217.2 210 61.0
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.8e-54 216.1 215 59.5
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 2.8e-54 216.1 210 60.5
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 3.7e-54 215.7 216 55.6
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 4.8e-54 215.3 209 58.9
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 6.3e-54 214.9 220 55.9
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.1e-53 214.2 210 60.5
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.4e-53 213.8 220 55.5
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 2.4e-53 213.0 211 57.8
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 4.1e-53 212.2 209 59.3
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.2e-52 210.7 210 60.0
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.0e-51 207.6 210 58.6
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 1.0e-51 207.6 206 57.3
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.7e-51 206.8 209 58.4
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 8.6e-51 204.5 216 53.7
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.5e-50 203.8 216 57.4
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.9e-50 203.4 216 55.1
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 1.9e-50 203.4 212 53.3
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 2.5e-50 203.0 216 56.9
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 7.2e-50 201.4 211 56.4
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 7.2e-50 201.4 208 57.7
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.8e-48 196.8 213 54.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 1.8e-48 196.8 208 54.8
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.3e-48 196.4 210 56.7
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 7.5e-47 191.4 209 56.0
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 9.8e-47 191.0 209 52.6
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 1.7e-46 190.3 215 53.0
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 2.8e-46 189.5 208 54.8
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 4.9e-46 188.7 200 56.5
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 6.3e-46 188.3 228 51.8
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.1e-45 187.6 199 54.8
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.1e-45 187.6 174 62.1
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.8e-45 186.8 199 54.3
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 1.8e-45 186.8 202 53.5
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.4e-45 186.4 209 52.6
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 5.4e-45 185.3 208 56.7
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.2e-44 184.1 204 54.9
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.5e-44 182.2 200 54.0
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 1.1e-42 177.6 217 51.2
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 9.5e-42 174.5 216 47.2
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 2.1e-41 173.3 221 47.5
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.6e-41 172.6 196 53.1
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 4.7e-41 172.2 199 49.7
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.8e-40 170.2 209 48.8
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.1e-40 169.5 206 50.5
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 5.2e-40 168.7 208 50.5
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.2e-39 167.5 211 47.9
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.5e-39 167.2 199 48.2
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 4.4e-39 165.6 216 44.9
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 5.8e-39 165.2 206 47.1
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.8e-39 165.2 199 49.2
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 7.5e-39 164.9 208 47.1
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 3.7e-38 162.5 200 48.5
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 3.7e-38 162.5 208 48.1
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 3.7e-38 162.5 211 46.9
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 8.3e-38 161.4 199 50.3
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 1.9e-37 160.2 202 49.0
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 1.9e-37 160.2 196 46.9
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.9e-37 160.2 201 49.3
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 3.2e-37 159.5 201 47.3
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.2e-37 159.5 218 48.6
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 7.0e-37 158.3 202 47.0
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.6e-36 157.1 211 46.9
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 7.8e-36 154.8 200 47.0
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.0e-35 154.5 199 47.2
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 3.0e-35 152.9 200 50.0
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.9e-35 152.5 200 48.0
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 5.0e-35 152.1 200 46.5
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 6.6e-35 151.8 200 49.5
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 6.6e-35 151.8 209 46.9
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 1.1e-34 151.0 212 43.9
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.5e-34 150.6 209 45.5
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.9e-34 150.2 204 48.5
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.9e-34 150.2 209 45.5
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 3.6e-33 146.0 194 49.5
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 3.6e-33 146.0 198 46.5
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 2.3e-32 143.3 193 43.0
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 3.1e-32 142.9 219 42.5
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 5.2e-32 142.1 176 48.3
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 5.2e-32 142.1 199 42.7
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 1.5e-31 140.6 188 43.6
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 1.5e-31 140.6 213 41.8
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 2.0e-31 140.2 161 50.9
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.6e-31 139.8 212 41.5
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.7e-30 137.1 212 42.9
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 2.9e-30 136.3 209 40.7
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 6.4e-30 135.2 220 41.8
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 6.4e-30 135.2 212 42.9
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 8.3e-30 134.8 219 41.6
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 4.1e-29 132.5 195 43.1
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 4.1e-29 132.5 209 42.1
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 2.7e-28 129.8 195 43.1
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 2.7e-28 129.8 146 54.1
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 4.6e-28 129.0 195 42.1
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 4.6e-28 129.0 191 45.0
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 3.9e-27 125.9 220 38.6
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 3.9e-27 125.9 192 43.8
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 8.6e-27 124.8 192 42.7
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 8.6e-27 124.8 192 42.7
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 8.6e-27 124.8 142 54.2
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 1.1e-26 124.4 192 43.2
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 2.5e-26 123.2 139 49.6
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 3.3e-26 122.9 194 41.2
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 5.6e-26 122.1 200 40.5
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 5.6e-26 122.1 190 43.2
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.2e-25 120.9 194 40.7
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 2.1e-25 120.2 183 42.6
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 4.7e-25 119.0 196 39.8
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 8.1e-25 118.2 186 42.5
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.3e-24 116.7 141 50.4
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 1.5e-23 114.0 217 38.7
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 2.2e-22 110.2 201 42.3
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.7e-22 109.4 201 38.3
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 4.9e-22 109.0 201 39.3
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 1.1e-21 107.8 212 37.3
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.9e-21 107.1 212 37.7
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 5.4e-21 105.5 113 52.2
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 9.2e-21 104.8 197 41.1
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.1e-18 97.8 205 37.6
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 9.6e-18 94.7 195 37.9
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 4.7e-17 92.4 194 37.6
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 6.2e-17 92.0 139 43.2
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 3.1e-16 89.7 120 43.3
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 2.5e-10 70.1 99 44.4
Psat6g017240 Pisum sativum HOM05D004648 ORTHO05D005782 2.0e-07 60.5 47 74.5
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 1.3e-06 57.8 80 45.0


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