Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 1.5e-83 313.2 200 100.0
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 1.0e-55 220.7 195 75.9
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 9.8e-51 204.1 205 66.8
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.8e-49 199.9 196 59.7
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 2.0e-40 169.9 194 55.2
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 7.3e-38 161.4 194 49.5
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 1.4e-33 147.1 194 53.1
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 6.0e-32 141.7 194 44.8
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.0e-31 141.0 195 45.6
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 1.7e-31 140.2 190 44.7
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 2.2e-26 123.2 189 39.7
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 8.6e-23 111.3 203 35.5
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 1.1e-22 110.9 202 47.0
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 1.5e-22 110.5 101 51.5
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 4.3e-22 109.0 194 50.5
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 5.6e-22 108.6 212 41.5
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 5.6e-22 108.6 91 57.1
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 2.1e-21 106.7 110 49.1
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 3.6e-21 105.9 201 33.3
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 1.4e-20 104.0 219 41.1
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.4e-20 104.0 180 36.1
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.4e-20 104.0 213 33.8
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 2.3e-20 103.2 173 31.8
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 2.3e-20 103.2 191 35.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.1e-20 102.8 171 32.2
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 3.1e-20 102.8 98 51.0
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 5.2e-20 102.1 188 36.2
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.2e-19 100.9 114 47.4
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.5e-19 100.5 191 35.6
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.6e-19 99.8 202 31.7
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 5.8e-19 98.6 94 48.9
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 1.3e-18 97.4 181 34.8
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.3e-18 97.4 181 34.8
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.9e-18 96.3 177 35.0
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 8.3e-18 94.7 93 49.5
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.1e-17 94.4 91 49.5
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 1.4e-17 94.0 118 43.2
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 3.2e-17 92.8 94 48.9
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 3.2e-17 92.8 86 50.0
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 4.1e-17 92.4 227 30.8
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 9.2e-17 91.3 90 47.8
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 1.2e-16 90.9 110 42.7
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.7e-16 89.7 81 49.4
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.7e-16 89.7 180 33.9
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 3.5e-16 89.4 243 30.0
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 3.5e-16 89.4 112 44.6
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 4.6e-16 89.0 104 43.3
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 6.0e-16 88.6 95 47.4
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 6.0e-16 88.6 95 47.4
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 6.0e-16 88.6 95 47.4
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 2.3e-15 86.7 111 39.6
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 1.1e-14 84.3 195 31.3
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 1.9e-14 83.6 120 39.2
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 4.3e-14 82.4 100 42.0
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 9.5e-14 81.3 103 42.7
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 1.2e-13 80.9 95 41.1
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 3.6e-13 79.3 115 39.1
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 4.0e-12 75.9 111 36.9
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.2e-12 75.5 185 27.6
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 5.2e-12 75.5 185 27.6
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 8.9e-12 74.7 90 42.2
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 1.2e-11 74.3 119 30.3
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 2.0e-11 73.6 113 40.7
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.2e-10 70.1 186 26.9
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 7.1e-09 65.1 64 46.9
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 2.7e-08 63.2 100 39.0
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 1.0e-07 61.2 113 37.2
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.7e-07 60.5 87 37.9
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 8.7e-07 58.2 174 25.3
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.8 53 49.1
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 2.5e-06 56.6 46 52.2
VMungo1309G2756 Vigna mungo HOM05D008012 ORTHO05D010154 9.6e-06 54.7 48 60.4


User provided reference genes

Program Settings