Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 6.5e-111 404.1 202 100.0
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 1.6e-64 250.0 156 79.5
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 3.3e-62 242.3 153 79.7
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 2.1e-61 239.6 151 80.1
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 4.0e-60 235.3 194 67.0
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 1.1e-49 200.7 140 73.6
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 6.0e-48 194.9 142 68.3
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 1.7e-47 193.4 137 71.5
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 3.9e-47 192.2 140 70.7
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 5.1e-47 191.8 142 66.9
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 8.6e-47 191.0 191 57.1
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 7.8e-40 167.9 129 65.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 5.6e-38 161.8 134 59.0
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 3.6e-37 159.1 134 56.7
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 8.1e-37 157.9 168 51.8
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 2.4e-36 156.4 156 57.7
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 6.9e-36 154.8 113 60.2
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 1.2e-35 154.1 169 46.2
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 2.0e-35 153.3 132 55.3
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 2.0e-35 153.3 149 51.0
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 2.0e-35 153.3 136 52.9
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 3.4e-35 152.5 113 61.9
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 4.4e-35 152.1 113 62.8
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 5.8e-35 151.8 165 49.7
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 7.6e-35 151.4 164 48.2
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 9.9e-35 151.0 132 53.8
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 9.9e-35 151.0 116 58.6
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 9.9e-35 151.0 120 59.2
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 1.7e-34 150.2 123 53.7
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 2.9e-34 149.4 108 63.0
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 2.9e-34 149.4 123 52.8
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 3.8e-34 149.1 107 61.7
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 4.9e-34 148.7 135 51.1
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 4.9e-34 148.7 135 51.1
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 6.4e-34 148.3 107 66.4
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 8.4e-34 147.9 105 61.9
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 8.4e-34 147.9 102 65.7
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 8.4e-34 147.9 111 61.3
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 1.1e-33 147.5 114 58.8
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 1.4e-33 147.1 111 58.6
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 1.9e-33 146.7 106 60.4
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 2.4e-33 146.4 105 61.9
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 2.4e-33 146.4 114 58.8
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 4.2e-33 145.6 105 62.9
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 5.4e-33 145.2 105 62.9
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 5.4e-33 145.2 105 62.9
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 5.4e-33 145.2 106 60.4
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 7.1e-33 144.8 164 50.0
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 9.3e-33 144.4 105 62.9
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.6e-32 143.7 107 58.9
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.6e-32 143.7 107 58.9
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 1.6e-32 143.7 102 62.7
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 2.1e-32 143.3 111 59.5
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 2.1e-32 143.3 116 56.0
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 2.7e-32 142.9 165 44.2
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 2.7e-32 142.9 143 51.0
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 4.6e-32 142.1 106 58.5
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 4.6e-32 142.1 113 57.5
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 7.8e-32 141.4 116 55.2
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 1.3e-31 140.6 89 68.5
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 1.3e-31 140.6 89 68.5
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 1.3e-31 140.6 143 51.7
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 1.3e-31 140.6 162 45.7
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 2.3e-31 139.8 89 68.5
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 2.3e-31 139.8 130 49.2
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 3.0e-31 139.4 106 55.7
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 3.0e-31 139.4 89 67.4
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 3.0e-31 139.4 113 54.9
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 3.9e-31 139.0 107 59.8
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 5.1e-31 138.7 114 57.9
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 6.6e-31 138.3 111 56.8
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 8.7e-31 137.9 111 56.8
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 1.5e-30 137.1 112 56.2
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 1.5e-30 137.1 110 53.6
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 2.5e-30 136.3 106 55.7
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 3.3e-30 136.0 113 54.0
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 3.3e-30 136.0 116 53.4
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 4.3e-30 135.6 105 59.0
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 5.6e-30 135.2 105 56.2
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 7.3e-30 134.8 111 55.9
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 1.6e-29 133.7 106 55.7
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 3.6e-29 132.5 91 62.6
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 3.6e-29 132.5 91 62.6
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 4.8e-29 132.1 89 62.9
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 8.1e-29 131.3 106 57.5
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 1.1e-28 131.0 110 55.5
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 1.2e-27 127.5 75 77.3
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 1.5e-27 127.1 107 57.0
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 3.4e-27 125.9 106 52.8
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 5.8e-27 125.2 131 45.8
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 9.9e-27 124.4 106 51.9
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 1.3e-26 124.0 106 52.8
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 1.7e-26 123.6 106 51.9
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 3.9e-23 112.5 88 56.8
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 6.7e-23 111.7 95 55.8
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 4.3e-22 109.0 65 72.3
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 2.8e-21 106.3 109 48.6
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 3.7e-21 105.9 88 54.5
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 2.6e-19 99.8 74 59.5
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 5.8e-19 98.6 94 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 8.4e-18 94.7 95 49.5
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 1.1e-17 94.4 78 55.1
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 1.9e-17 93.6 68 61.8
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 1.9e-17 93.6 68 61.8
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 2.5e-17 93.2 49 81.6
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 5.5e-17 92.0 49 79.6
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 5.5e-17 92.0 65 58.5
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 5.5e-17 92.0 102 42.2
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 7.1e-17 91.7 106 43.4
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 7.9e-16 88.2 91 48.4
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.0e-15 87.8 87 52.9
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 9.6e-14 81.3 98 45.9
arahy.Tifrunner.gnm1.ann1.GWHG3I Arachis hypogaea HOM05D006249 ORTHO05D007643 3.1e-12 76.3 78 53.8
SHI29847 Sapria himalayana HOM05D006249 ORTHO05D007643 5.8e-11 72.0 63 49.2
SHI31647 Sapria himalayana HOM05D006249 ORTHO05D007643 3.8e-10 69.3 101 39.6
SHI29011 Sapria himalayana HOM05D006249 ORTHO05D007643 5.5e-09 65.5 66 45.5
arahy.Tifrunner.gnm1.ann1.X4NPJI Arachis hypogaea HOM05D004045 ORTHO05D004923 6.1e-08 62.0 93 43.0
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 6.1e-08 62.0 116 32.8
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 2.3e-07 60.1 55 54.5
SHI27267 Sapria himalayana HOM05D000624 ORTHO05D000495 8.7e-07 58.2 56 48.2
Psat5g265600 Pisum sativum HOM05D006249 ORTHO05D007643 2.5e-06 56.6 66 51.5
MCO14G208 Micromonas commoda HOM05D006249 ORTHO05D007643 4.3e-06 55.8 86 37.2
SHI41947 Sapria himalayana HOM05D000624 ORTHO05D000495 4.3e-06 55.8 50 54.0
SHI04506 Sapria himalayana HOM05D006249 ORTHO05D007643 7.4e-06 55.1 54 44.4
SHI43714 Sapria himalayana HOM05D000624 ORTHO05D007643 7.4e-06 55.1 49 51.0
SHI45616 Sapria himalayana HOM05D000624 ORTHO05D000495 7.4e-06 55.1 55 50.9


User provided reference genes

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