Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 3.1e-159 565.1 287 100.0
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 1.4e-135 486.5 291 85.6
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.3e-133 479.9 288 86.5
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 1.5e-129 466.5 292 85.6
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 1.4e-119 433.3 283 80.6
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 9.5e-116 420.6 290 77.9
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 2.6e-113 412.5 289 74.0
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 1.3e-112 410.2 293 73.0
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.9e-108 396.4 286 73.1
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.1e-98 362.5 243 74.5
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.1e-98 362.5 243 74.5
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 2.6e-97 359.4 283 67.8
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 5.8e-97 358.2 288 64.9
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 5.8e-97 358.2 236 76.3
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 4.9e-96 355.1 286 66.1
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 1.1e-95 354.0 244 75.0
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.4e-95 352.8 293 65.9
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 2.4e-95 352.8 288 64.6
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.2e-95 352.1 290 65.2
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 5.4e-95 351.7 231 76.6
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 9.3e-95 350.9 283 66.8
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 2.7e-94 349.4 296 63.2
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.7e-94 349.4 292 64.4
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 4.6e-94 348.6 289 64.4
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 7.8e-94 347.8 263 70.7
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.7e-93 346.7 292 63.7
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 1.7e-93 346.7 294 64.3
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 2.3e-93 346.3 284 66.5
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 3.0e-93 345.9 271 66.1
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 6.6e-93 344.7 278 66.9
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 6.6e-93 344.7 254 70.5
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 8.7e-93 344.4 235 74.9
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.1e-92 344.0 243 72.0
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.1e-92 344.0 277 67.1
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 5.6e-92 341.7 247 70.4
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 9.6e-92 340.9 243 71.6
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 1.3e-91 340.5 284 64.8
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.6e-91 340.1 290 64.5
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.1e-91 339.7 265 69.4
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.1e-91 339.7 283 65.7
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.8e-91 339.3 287 65.2
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 6.2e-91 338.2 252 70.6
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 8.1e-91 337.8 281 64.4
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 8.1e-91 337.8 254 67.3
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.4e-90 336.3 288 62.2
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.4e-90 336.3 294 61.2
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.2e-89 334.0 239 69.5
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 2.0e-89 333.2 249 67.9
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 3.4e-89 332.4 292 63.0
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 5.8e-89 331.6 235 71.1
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 5.8e-89 331.6 240 68.8
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 2.9e-88 329.3 240 69.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 3.8e-88 328.9 292 61.6
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.8e-88 328.9 235 70.6
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 4.9e-88 328.6 278 62.2
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 4.9e-88 328.6 235 70.2
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 6.4e-88 328.2 242 71.9
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-87 327.4 243 66.7
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-87 327.4 243 67.1
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 1.4e-87 327.0 279 59.5
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 7.1e-87 324.7 270 62.2
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 7.1e-87 324.7 216 74.5
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 1.6e-86 323.6 241 67.2
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.6e-86 323.6 267 62.2
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 2.1e-86 323.2 277 61.0
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 3.5e-86 322.4 241 67.2
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 4.6e-86 322.0 281 60.5
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 4.6e-86 322.0 241 67.2
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 7.9e-86 321.2 282 61.7
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.0e-85 320.9 235 67.2
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 1.3e-85 320.5 238 66.8
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 2.3e-85 319.7 241 66.8
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 2.3e-85 319.7 258 67.1
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 3.0e-85 319.3 233 70.4
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 3.9e-85 318.9 233 68.7
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 3.9e-85 318.9 253 64.0
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.9e-84 316.6 298 57.7
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 2.5e-84 316.2 277 61.4
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 9.6e-84 314.3 250 63.6
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 1.6e-83 313.5 281 59.4
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 9.0e-82 307.8 242 64.5
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.2e-81 307.4 248 63.3
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.5e-81 307.0 280 60.0
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 1.3e-80 303.9 280 56.8
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.3e-80 303.9 263 61.2
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.7e-80 303.5 378 50.5
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 2.2e-80 303.1 216 69.4
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 2.2e-80 303.1 285 56.5
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 4.9e-80 302.0 288 58.7
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 8.4e-80 301.2 244 61.9
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.9e-79 300.1 235 62.6
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 9.3e-79 297.7 284 57.4
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.1e-76 290.8 246 63.0
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.4e-74 283.9 214 65.0
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.4e-74 283.1 325 48.9
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 6.9e-74 281.6 403 43.7
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 3.5e-70 269.2 189 71.4
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.8e-69 266.9 189 72.0
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.1e-68 264.2 234 60.3
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 3.1e-66 256.1 324 47.5
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 5.3e-66 255.4 241 51.5
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 9.0e-66 254.6 237 52.3
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 3.6e-62 242.7 248 51.2
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.0e-61 241.1 141 87.9
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 2.3e-61 240.0 233 51.9
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.3e-59 234.2 235 49.4
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 2.8e-59 233.0 173 68.2
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 4.1e-58 229.2 241 53.9
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 6.9e-58 228.4 292 46.9
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 9.1e-58 228.0 181 63.0
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.5e-57 227.3 239 52.3
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.7e-54 216.5 260 45.0
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 3.3e-52 209.5 174 62.6
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 2.6e-49 199.9 242 46.3
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.3e-48 197.6 158 63.9
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 5.5e-47 192.2 291 41.6
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 7.4e-44 181.8 238 43.7
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 5.2e-37 159.1 129 61.2
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 2.8e-35 153.3 122 61.5
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-31 141.4 187 44.4
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 4.0e-29 132.9 162 46.9
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 5.4e-18 95.9 72 63.9
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 8.3e-11 72.0 64 53.1


User provided reference genes

Program Settings