Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 4.6e-121 438.0 230 100.0
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 9.4e-98 360.5 231 84.8
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 2.3e-96 355.9 231 81.8
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 6.3e-94 347.8 230 80.9
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 2.4e-93 345.9 231 82.3
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 9.1e-93 344.0 230 80.0
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 2.6e-92 342.4 230 79.6
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 2.3e-88 329.3 230 77.0
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 5.2e-80 301.6 241 71.4
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 3.7e-78 295.4 186 83.3
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 3.7e-78 295.4 242 68.6
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.4e-77 293.5 248 70.2
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 9.1e-77 290.8 240 66.7
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 3.5e-76 288.9 233 68.2
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 3.8e-75 285.4 205 72.7
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 1.2e-73 280.4 238 66.8
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 2.7e-73 279.3 237 66.7
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 6.1e-73 278.1 220 68.2
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 8.0e-73 277.7 237 66.2
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 3.0e-72 275.8 237 65.4
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.0e-72 275.8 237 65.4
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 4.0e-72 275.4 220 67.7
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.2e-71 273.9 237 65.4
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 4.4e-71 271.9 196 72.4
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.7e-70 270.0 231 68.4
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 2.2e-70 269.6 228 64.9
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 8.3e-70 267.7 239 66.1
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 4.1e-69 265.4 234 65.4
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.2e-68 263.8 205 69.8
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 2.0e-68 263.1 243 60.1
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 2.0e-68 263.1 243 59.3
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.7e-68 262.7 195 69.7
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 2.7e-68 262.7 244 63.9
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.7e-68 262.7 218 63.8
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 3.5e-68 262.3 214 65.9
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 4.5e-68 261.9 227 67.4
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.0e-67 260.8 244 59.4
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.3e-67 260.4 288 55.6
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 1.3e-67 260.4 236 65.3
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 2.9e-67 259.2 214 67.8
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 8.6e-67 257.7 218 62.4
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.3e-66 255.8 198 69.7
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.5e-63 246.9 184 71.2
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 2.6e-63 246.1 221 62.4
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 4.4e-63 245.4 240 59.6
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 5.7e-63 245.0 226 58.0
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 5.7e-63 245.0 205 64.4
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.8e-62 242.7 235 60.4
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 4.9e-62 241.9 204 62.7
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 4.9e-62 241.9 240 56.2
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 6.3e-62 241.5 239 58.6
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 6.3e-62 241.5 172 75.0
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 1.4e-61 240.4 205 64.9
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 9.2e-61 237.7 215 62.8
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 3.5e-60 235.7 240 57.5
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 4.5e-60 235.3 206 63.6
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.3e-59 233.8 234 57.7
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.3e-59 233.8 172 70.9
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.1e-58 230.7 229 55.9
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 1.9e-58 229.9 228 56.1
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 3.3e-58 229.2 221 55.7
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 3.3e-58 229.2 227 55.9
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 3.3e-58 229.2 204 60.3
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 5.6e-58 228.4 176 68.8
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 7.3e-58 228.0 216 56.9
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 7.3e-58 228.0 216 56.9
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 7.3e-58 228.0 216 56.9
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 9.5e-58 227.6 226 56.2
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 2.1e-57 226.5 216 57.9
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 3.6e-57 225.7 226 58.4
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 4.7e-57 225.3 217 57.1
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 8.0e-57 224.6 226 59.3
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 1.0e-56 224.2 218 57.3
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 1.8e-56 223.4 208 59.1
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.8e-56 223.4 201 61.2
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 4.0e-56 222.2 216 56.0
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 8.9e-56 221.1 239 53.1
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 3.4e-55 219.2 203 59.6
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 3.7e-54 215.7 173 65.9
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 4.9e-54 215.3 222 58.1
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 1.1e-53 214.2 232 53.4
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 3.5e-52 209.1 205 58.5
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 4.3e-50 202.2 213 53.5
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 2.8e-49 199.5 200 56.0
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 6.8e-48 194.9 162 66.0
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 2.0e-47 193.4 174 60.9
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.7e-46 190.3 166 60.2
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 6.6e-43 178.3 134 69.4
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 6.6e-43 178.3 237 50.2
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 7.3e-42 174.9 185 49.7
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 7.3e-42 174.9 233 48.5
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 2.1e-41 173.3 185 50.8
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.1e-40 171.0 160 59.4
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 1.2e-39 167.5 221 47.1
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 5.1e-35 152.1 358 35.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 8.6e-35 151.4 146 52.1
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 1.4e-32 144.1 103 71.8
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.2e-30 136.7 104 70.2
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.2e-30 136.7 104 70.2
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 9.6e-26 121.3 154 42.9
Glyma.04G055801 Glycine max HOM05D007323 ORTHO05D009238 3.5e-20 102.8 127 51.2
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 3.9e-19 99.4 64 79.7
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 3.1e-16 89.7 184 33.7
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 3.3e-10 69.7 103 44.7
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 6.2e-09 65.5 157 32.5
TAR624G1004 Trochodendron aralioides HOM05D000386 ORTHO05D414906 8.4e-06 55.1 43 62.8


User provided reference genes

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