Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.6e-87 324.3 172 100.0
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.6e-87 324.3 172 100.0
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 4.9e-75 284.6 172 86.6
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 8.3e-75 283.9 172 88.4
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.9e-74 282.7 169 87.6
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 2.4e-74 282.3 172 86.0
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 2.4e-74 282.3 170 87.6
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 7.1e-74 280.8 172 86.0
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 3.5e-73 278.5 172 84.3
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 3.0e-72 275.4 172 83.1
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 5.1e-72 274.6 171 85.4
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.9e-71 272.7 172 84.3
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 9.5e-71 270.4 172 82.6
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.6e-70 269.6 172 80.8
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.8e-70 268.9 172 80.8
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 6.2e-70 267.7 174 81.6
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.1e-69 266.9 172 79.7
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 1.8e-69 266.2 173 80.9
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 3.1e-69 265.4 172 80.8
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.2e-69 264.6 193 75.1
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 6.8e-69 264.2 172 79.7
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 1.2e-68 263.5 172 78.5
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 1.2e-68 263.5 174 79.9
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.2e-68 263.5 174 79.9
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.2e-68 263.5 173 80.3
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 1.2e-68 263.5 172 80.2
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 2.0e-68 262.7 172 79.7
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.0e-68 262.7 172 80.8
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 4.4e-68 261.5 172 80.8
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 5.8e-68 261.2 174 79.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.6e-68 260.8 180 78.9
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.7e-67 259.6 172 77.9
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 3.8e-67 258.5 172 79.1
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.1e-66 256.9 172 78.5
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.4e-66 256.5 172 78.5
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.9e-66 256.1 173 80.3
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 1.9e-66 256.1 172 78.5
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.4e-66 255.8 166 79.5
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 2.4e-66 255.8 172 77.3
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.2e-66 255.4 149 91.3
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 5.4e-66 254.6 173 78.0
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 9.2e-66 253.8 172 77.9
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 9.2e-66 253.8 172 78.5
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.2e-65 253.4 173 78.6
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.6e-65 253.1 172 76.7
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.6e-65 251.5 168 78.6
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 4.6e-65 251.5 181 75.7
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 6.0e-65 251.1 150 86.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 7.8e-65 250.8 172 77.3
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.3e-64 250.0 172 76.7
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.7e-64 249.6 172 77.3
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 2.3e-64 249.2 172 77.3
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 3.9e-64 248.4 172 76.7
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 3.9e-64 248.4 172 76.7
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 3.9e-64 248.4 173 76.3
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 5.1e-64 248.1 172 74.4
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.5e-63 246.5 172 75.6
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 2.5e-63 245.7 167 77.2
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 4.7e-62 241.5 144 88.2
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 6.2e-62 241.1 144 87.5
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 6.2e-62 241.1 173 74.0
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 8.1e-62 240.7 172 73.3
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.1e-61 240.4 172 72.1
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.8e-61 239.6 167 76.6
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 3.4e-60 235.3 144 83.3
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 5.4e-58 228.0 173 72.3
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 5.4e-58 228.0 165 72.7
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.2e-57 226.9 165 74.5
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.2e-57 226.9 165 72.1
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 2.7e-57 225.7 173 71.1
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 6.0e-57 224.6 150 80.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 7.8e-57 224.2 165 72.7
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 7.8e-57 224.2 165 72.7
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 1.3e-56 223.4 173 69.9
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.7e-56 223.0 173 71.1
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 2.3e-56 222.6 173 70.5
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 6.6e-56 221.1 173 69.9
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 8.7e-56 220.7 163 73.6
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 8.7e-56 220.7 144 79.9
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 3.3e-55 218.8 173 72.3
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 3.3e-55 218.8 149 77.9
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 9.6e-55 217.2 144 79.9
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.8e-54 215.7 172 69.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 4.8e-54 214.9 166 70.5
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 1.8e-53 213.0 144 77.8
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 6.9e-53 211.1 142 78.2
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.2e-52 210.3 165 64.2
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 1.7e-51 206.5 143 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 6.4e-51 204.5 165 62.4
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 3.2e-50 202.2 165 61.8
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 4.2e-50 201.8 150 72.7
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 4.2e-50 201.8 172 64.5
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 6.0e-49 198.0 165 62.4
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 5.1e-48 194.9 172 64.0
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.9e-47 193.0 172 64.0
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 9.3e-42 174.1 165 57.0
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.5e-41 172.2 111 81.1
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 6.7e-40 167.9 123 75.6
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 8.7e-40 167.5 120 73.3
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 9.6e-39 164.1 110 75.5
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.1e-37 160.6 144 63.9
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.5e-36 156.8 139 69.1
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 1.4e-34 150.2 116 72.4
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.4e-34 150.2 118 67.8
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.7e-30 135.6 167 53.9
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 4.8e-30 135.2 99 72.7
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 2.6e-28 129.4 159 44.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.7e-27 126.7 89 75.3
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 8.5e-27 124.4 165 40.6
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-24 116.7 99 64.6
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.8e-24 116.7 95 69.5
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 3.9e-24 115.5 87 70.1
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 3.9e-24 115.5 104 61.5
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 6.7e-24 114.8 86 70.9
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 8.7e-24 114.4 128 53.1
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 8.7e-24 114.4 120 56.7
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.3e-22 110.5 86 73.3
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 2.2e-22 109.8 177 41.2
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.2e-19 99.8 71 74.6
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.6e-17 93.6 104 53.8
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 9.7e-15 84.3 115 47.0
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 8.2e-14 81.3 58 75.9
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 4.1e-13 79.0 63 66.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 2.2e-11 73.2 86 51.2
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 3.8e-11 72.4 51 72.5
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 8.5e-11 71.2 55 69.1
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 2.5e-10 69.7 58 60.3
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 7.2e-10 68.2 58 62.1
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.8e-08 63.5 39 76.9


User provided reference genes

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