Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.2e-307 1058.9 510 100.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 8.9e-274 946.4 502 90.6
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.4e-271 939.1 503 89.9
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.0e-270 935.3 504 88.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 9.8e-257 889.8 503 84.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 5.1e-245 850.9 498 80.1
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 2.5e-244 848.6 499 80.2
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.1e-243 845.5 481 82.1
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.2e-241 839.7 475 82.7
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 5.8e-241 837.4 481 81.7
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 6.4e-240 833.9 511 77.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.6e-235 818.1 492 78.3
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 6.2e-235 817.4 497 77.3
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 7.6e-233 810.4 496 75.2
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 7.1e-231 803.9 491 74.9
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.0e-229 800.0 498 74.1
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.3e-229 798.9 498 73.9
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 3.9e-229 798.1 495 76.6
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.1e-228 796.6 501 74.1
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.9e-228 795.8 508 73.8
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 7.4e-228 793.9 492 75.0
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 7.4e-228 793.9 498 75.3
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 3.6e-227 791.6 497 74.4
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 3.1e-226 788.5 497 74.8
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 5.3e-226 787.7 492 73.8
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.4e-225 785.0 496 74.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.9e-224 781.9 499 73.7
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 3.8e-224 781.6 498 74.5
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 7.1e-223 777.3 498 73.1
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.6e-222 776.2 509 71.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 4.6e-222 774.6 500 73.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 4.6e-222 774.6 491 73.7
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 6.0e-222 774.2 477 74.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.3e-221 772.3 482 74.7
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.9e-221 771.5 504 73.2
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.1e-220 770.0 496 73.4
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 2.5e-220 768.8 482 74.7
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 7.4e-220 767.3 496 71.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.3e-219 766.5 511 70.1
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.7e-219 765.0 508 70.9
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 9.0e-218 760.4 480 72.9
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.5e-217 759.6 540 67.0
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.0e-217 759.2 493 73.2
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.4e-217 758.4 481 71.5
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.5e-217 758.1 502 70.7
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 5.8e-217 757.7 479 72.7
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.3e-216 756.5 497 72.4
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 1.7e-216 756.1 480 72.7
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 3.8e-216 755.0 498 70.5
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 8.4e-216 753.8 481 71.5
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.5e-215 752.3 489 70.8
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 3.2e-215 751.9 505 71.3
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.2e-214 750.0 497 70.4
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.6e-214 749.6 504 70.0
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 2.1e-214 749.2 489 70.3
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 7.9e-214 747.3 504 69.8
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.3e-213 746.5 487 70.4
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.0e-213 745.3 487 71.9
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 1.3e-211 740.0 505 70.1
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.3e-211 740.0 507 68.2
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.8e-211 738.8 501 69.7
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.8e-211 738.8 501 69.5
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 5.3e-210 734.6 480 70.0
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 9.0e-210 733.8 487 69.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-209 733.4 463 75.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.3e-208 729.9 454 74.4
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.3e-208 729.9 486 70.2
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.0e-208 728.0 503 69.4
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 1.9e-207 726.1 464 72.2
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.5e-207 725.7 500 68.8
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.5e-207 725.7 481 70.3
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 7.2e-207 724.2 503 68.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.1e-206 722.6 487 68.6
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 3.6e-206 721.8 500 68.2
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.0e-205 720.3 486 70.0
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 5.1e-205 718.0 503 67.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 5.1e-205 718.0 503 67.6
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 5.1e-205 718.0 480 69.8
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.1e-205 718.0 469 71.2
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.1e-205 718.0 503 68.2
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 8.7e-205 717.2 503 67.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.1e-204 716.8 497 68.8
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 8.2e-203 710.7 506 66.8
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 6.9e-202 707.6 481 67.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 4.5e-201 704.9 525 65.3
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.2e-200 702.6 488 68.2
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 6.5e-200 701.0 506 66.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 7.2e-199 697.6 480 67.1
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.1e-198 696.0 453 72.0
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.1e-198 696.0 497 66.8
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.0e-197 692.2 500 66.4
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 5.1e-197 691.4 511 67.3
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 3.3e-196 688.7 544 62.9
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.2e-191 671.8 507 64.5
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.8e-189 666.4 494 66.0
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 3.2e-175 619.0 481 59.7
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.3e-160 569.7 379 70.4
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 4.1e-154 548.9 374 69.0
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.6e-148 529.6 337 73.6
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.7e-147 525.8 353 68.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.0e-136 491.1 353 65.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.9e-119 433.7 307 66.1
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.4e-117 426.8 315 64.4
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.3e-114 414.8 501 46.5
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.4e-98 364.4 237 66.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 4.6e-89 332.8 214 66.8
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.1e-74 285.0 183 72.1
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-68 265.0 169 73.4
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.6e-57 228.0 141 73.8
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 6.1e-57 226.1 148 65.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 9.9e-23 112.5 104 58.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.2e-15 89.0 52 73.1
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.1e-12 78.2 78 50.0
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 1.3e-11 75.5 79 49.4
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 9.9e-07 59.3 35 74.3


User provided reference genes

Program Settings