Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 7.9e-91 337.0 164 100.0
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 7.0e-55 217.6 164 65.2
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 1.0e-53 213.8 174 67.8
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 4.9e-40 168.3 158 58.2
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 6.2e-35 151.4 166 51.8
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.8e-34 149.8 161 53.4
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 4.1e-31 138.7 165 48.5
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 6.0e-30 134.8 169 53.8
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.5e-28 129.4 165 46.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 9.5e-28 127.5 169 52.1
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 3.6e-27 125.6 152 47.4
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.3e-24 117.1 172 41.3
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 1.3e-24 117.1 88 67.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 5.4e-23 111.7 136 50.0
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 7.8e-22 107.8 171 38.6
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 5.2e-18 95.1 164 39.0
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 5.2e-18 95.1 164 39.0
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 6.8e-18 94.7 167 39.5
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 8.9e-18 94.4 165 39.4
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 5.8e-17 91.7 166 40.4
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 9.9e-17 90.9 163 36.2
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.3e-16 90.5 164 36.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 2.2e-16 89.7 167 37.7
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.1e-15 87.4 169 39.1
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 1.9e-15 86.7 166 38.0
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 2.4e-15 86.3 164 35.4
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 4.2e-15 85.5 168 36.3
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 5.4e-15 85.1 164 34.8
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 4.6e-14 82.0 167 38.3
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 4.6e-14 82.0 147 40.1
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 7.8e-14 81.3 169 36.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.0e-13 80.9 164 35.4
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.3e-13 80.5 166 38.6
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.3e-13 80.5 164 34.8
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 3.0e-13 79.3 165 33.9
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 3.0e-13 79.3 165 37.6
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 3.0e-13 79.3 173 35.3
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 3.9e-13 79.0 152 37.5
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 3.9e-13 79.0 172 32.6
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 3.9e-13 79.0 149 39.6
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 5.1e-13 78.6 169 35.5
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 6.6e-13 78.2 166 39.2
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.1e-12 77.4 164 34.8
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.1e-12 77.4 143 38.5
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.9e-12 76.6 128 38.3
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.9e-12 76.6 147 36.7
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.9e-12 76.6 166 38.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.5e-12 76.3 170 34.7
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 3.3e-12 75.9 164 37.2
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 4.3e-12 75.5 153 31.4
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 4.3e-12 75.5 162 34.6
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 5.6e-12 75.1 162 31.5
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.6e-12 75.1 147 36.1
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 7.3e-12 74.7 162 34.0
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.3e-12 74.7 147 35.4
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 9.6e-12 74.3 64 59.4
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.6e-11 73.6 180 33.9
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.6e-11 72.4 171 32.2
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 6.2e-11 71.6 128 39.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 6.2e-11 71.6 74 52.7
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.1e-10 70.9 68 52.9
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 4.0e-10 68.9 153 34.0
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 4.0e-10 68.9 171 32.2
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 6.9e-10 68.2 122 40.2
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 9.0e-10 67.8 168 33.3
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 9.0e-10 67.8 163 34.4
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 1.2e-09 67.4 169 32.0
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 1.2e-09 67.4 162 31.5
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.2e-09 67.4 65 49.2
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 5.8e-09 65.1 167 31.7
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.8e-09 65.1 166 31.3
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 7.6e-09 64.7 64 50.0
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 7.6e-09 64.7 64 50.0
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 7.6e-09 64.7 64 50.0
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 9.9e-09 64.3 89 41.6
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.3e-08 63.9 64 50.0
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 1.7e-08 63.5 64 48.4
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 2.9e-08 62.8 64 48.4
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 2.9e-08 62.8 64 48.4
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.9e-08 62.8 64 48.4
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.9e-08 62.8 68 47.1
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 8.4e-08 61.2 64 46.9
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 8.4e-08 61.2 144 32.6
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.1e-07 60.8 64 46.9
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.1e-07 60.8 55 56.4
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.1e-07 60.8 165 32.1
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 2.4e-07 59.7 64 46.9
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 2.4e-07 59.7 69 46.4
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.2e-07 59.3 67 47.8
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 3.2e-07 59.3 138 31.9
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 5.4e-07 58.5 65 44.6
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 7.1e-07 58.2 64 45.3
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.2e-06 57.4 169 30.2
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.2e-06 57.4 145 31.7
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 7.8e-06 54.7 145 30.3


User provided reference genes

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