Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 7.0e-201 703.7 355 100.0
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 2.3e-172 609.0 352 86.4
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 2.3e-172 609.0 354 85.6
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 4.0e-172 608.2 354 85.9
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.7e-168 595.5 354 84.2
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 2.3e-167 592.4 353 85.0
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 7.3e-166 587.4 351 84.9
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 8.1e-157 557.4 355 80.3
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 6.4e-154 547.7 357 77.6
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 5.4e-153 544.7 355 78.6
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 2.4e-148 529.3 357 74.8
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 1.2e-147 526.9 354 78.5
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.0e-147 526.2 350 75.7
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 1.3e-146 523.5 352 75.0
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 1.3e-146 523.5 351 75.8
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 8.4e-146 520.8 357 75.9
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 7.1e-145 517.7 323 80.8
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.0e-143 513.8 376 71.5
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 3.0e-143 512.3 355 72.7
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 4.3e-142 508.4 355 74.1
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 7.3e-142 507.7 355 74.9
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 9.6e-142 507.3 307 83.1
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 6.2e-141 504.6 333 77.2
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 1.1e-140 503.8 355 73.5
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 5.8e-139 498.0 356 73.3
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 3.8e-138 495.4 328 76.8
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 8.4e-138 494.2 356 71.9
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 8.4e-138 494.2 315 78.1
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.4e-137 492.7 355 73.0
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 2.1e-136 489.6 319 74.9
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.1e-136 489.6 318 75.5
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 1.7e-135 486.5 317 77.0
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.0e-135 485.7 359 68.5
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 3.0e-135 485.7 313 76.7
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 6.6e-135 484.6 313 76.4
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.1e-134 483.8 354 68.4
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.5e-134 483.4 355 68.5
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 3.3e-134 482.3 313 77.0
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 2.8e-133 479.2 356 67.1
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 2.8e-133 479.2 356 67.1
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 5.8e-131 471.5 315 74.9
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.3e-130 470.3 320 74.4
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.7e-130 469.9 315 75.2
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 3.8e-130 468.8 333 69.7
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 4.9e-130 468.4 333 69.7
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 7.1e-129 464.5 350 68.3
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 1.2e-128 463.8 324 75.3
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.2e-128 463.8 357 65.5
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 6.0e-128 461.5 321 72.0
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 6.0e-128 461.5 319 72.7
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 7.9e-128 461.1 355 70.7
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.0e-127 460.7 320 72.2
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 1.3e-127 460.3 313 71.9
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 3.9e-127 458.8 320 71.9
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 3.9e-127 458.8 317 69.7
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 1.9e-126 456.4 314 72.0
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 2.5e-126 456.1 350 66.9
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 3.3e-126 455.7 351 66.4
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 4.8e-125 451.8 319 71.2
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 2.4e-124 449.5 328 67.7
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 2.2e-122 443.0 304 72.4
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 3.2e-121 439.1 319 71.5
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 5.5e-121 438.3 264 84.1
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 9.3e-121 437.6 279 77.1
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 2.7e-120 436.0 318 67.9
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.0e-119 434.1 357 62.7
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 3.9e-119 432.2 278 78.4
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 5.1e-119 431.8 294 74.1
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 8.7e-119 431.0 357 62.5
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 8.7e-119 431.0 314 67.5
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.1e-118 430.6 357 62.5
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.3e-118 429.1 352 65.3
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 1.6e-117 426.8 315 68.3
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 1.8e-116 423.3 306 68.3
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 5.3e-116 421.8 411 57.7
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.2e-115 420.6 315 67.6
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 2.0e-115 419.9 328 68.0
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 2.0e-115 419.9 331 65.6
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 3.4e-115 419.1 315 67.6
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 5.8e-115 418.3 317 64.7
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 7.6e-115 417.9 314 65.6
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 7.6e-115 417.9 313 67.4
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.3e-114 417.2 313 67.4
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 3.8e-114 415.6 317 65.9
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.1e-113 414.1 320 64.1
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 2.5e-113 412.9 316 66.1
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 1.2e-112 410.6 355 58.9
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 1.6e-112 410.2 351 59.8
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.6e-109 400.2 301 66.8
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 2.8e-109 399.4 320 64.4
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 1.4e-108 397.1 239 82.0
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.2e-107 394.0 281 72.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 2.0e-107 393.3 298 67.4
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 4.5e-107 392.1 357 58.8
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 5.0e-106 388.7 323 62.8
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 2.5e-105 386.3 319 62.4
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 2.1e-104 383.3 264 72.3
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 6.7e-103 378.3 288 70.8
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 1.7e-98 363.6 313 58.5
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 1.5e-94 350.5 205 82.9
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 1.1e-92 344.4 313 60.1
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 6.6e-58 228.8 235 57.0
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.1e-47 194.9 328 35.4
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 3.4e-46 189.9 328 39.0
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 9.8e-46 188.3 315 36.5
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.1e-44 184.9 140 67.1
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.9e-44 184.1 298 38.6
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 4.1e-44 183.0 287 38.7
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.7e-42 177.6 313 32.3
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 5.1e-42 176.0 234 44.9
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.1e-41 174.9 244 45.9
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.1e-39 168.3 133 64.7
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.1e-39 168.3 222 46.4
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.8e-23 114.4 137 49.6
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 4.0e-23 113.2 77 68.8
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 2.2e-21 107.5 141 48.9


User provided reference genes

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