Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15666_v3 Cicer arietinum L. HOM05D013197 ORTHO05D009846 4.4e-126 454.9 275 100.0
TPR.G12338 Trifolium pratense HOM05D013197 ORTHO05D012811 1.1e-23 114.8 231 48.1
Psat5g024920 Pisum sativum HOM05D013197 ORTHO05D012811 3.8e-21 106.3 223 52.0
Lalb_Chr11g0064151 Lupinus albus HOM05D013197 ORTHO05D012811 8.8e-18 95.1 428 34.3
Medtr3g108830 Medicago truncatula HOM05D013197 ORTHO05D009846 8.8e-18 95.1 499 30.7
Lalb_Chr23g0269121 Lupinus albus HOM05D013197 ORTHO05D012811 6.3e-16 89.0 452 30.5
Lalb_Chr08g0243541 Lupinus albus HOM05D013197 ORTHO05D012811 1.4e-15 87.8 393 33.6
Ca_12855_v3 Cicer arietinum L. HOM05D016469 ORTHO05D012811 3.0e-10 70.1 284 34.5
Lj1g0027444 Lotus japonicus HOM05D013197 ORTHO05D009846 4.0e-10 69.7 474 27.6
Glyma.06G076700 Glycine max HOM05D013197 ORTHO05D012811 2.0e-09 67.4 419 29.6
Phvul.009G101300 Phaseolus vulgaris HOM05D013197 ORTHO05D012811 2.0e-09 67.4 210 37.6
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 2.6e-09 67.0 234 33.3
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 4.4e-09 66.2 44 77.3
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 3.7e-08 63.2 44 72.7
Cfa013269 Carpinus fangiana HOM05D014278 ORTHO05D009846 4.8e-08 62.8 42 73.8
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 4.8e-08 62.8 42 73.8
arahy.Tifrunner.gnm1.ann1.5VU8UR Arachis hypogaea HOM05D041085 ORTHO05D012811 1.1e-07 61.6 42 76.2
arahy.Tifrunner.gnm1.ann1.8MY5LV Arachis hypogaea HOM05D041085 ORTHO05D012811 1.1e-07 61.6 42 76.2
Glyma.04G075500 Glycine max HOM05D013197 ORTHO05D012811 3.1e-07 60.1 409 31.1
Atru.chr7.2642 Acer truncatum HOM05D019337 ORTHO05D009846 4.1e-07 59.7 44 70.5
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 4.1e-07 59.7 145 37.9
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 4.1e-07 59.7 352 27.0
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 7.0e-07 58.9 45 68.9
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 7.0e-07 58.9 141 38.3
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 7.0e-07 58.9 45 71.1
VMungo0464G1515 Vigna mungo HOM05D016469 ORTHO05D012811 9.1e-07 58.5 37 78.4
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 1.6e-06 57.8 336 27.7
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.0e-06 57.4 83 50.6
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 2.7e-06 57.0 44 65.9
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 2.7e-06 57.0 45 68.9
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 3.5e-06 56.6 39 69.2
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 3.5e-06 56.6 382 28.5
Lalb_Chr22g0361231 Lupinus albus HOM05D041085 ORTHO05D012811 7.7e-06 55.5 276 37.0
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 7.7e-06 55.5 174 35.1
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 7.7e-06 55.5 174 35.1
SGA_v2.0_scaffold121G33031 Striga asiatica HOM05D009522 ORTHO05D009846 7.7e-06 55.5 44 61.4


User provided reference genes

Program Settings