Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 5.2e-78 294.3 144 100.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 5.2e-78 294.3 144 100.0
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 1.4e-70 269.6 144 90.3
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.1e-67 260.0 144 88.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.8e-67 259.2 144 86.1
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.2e-66 256.5 144 87.5
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 8.6e-65 250.4 144 86.1
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 2.5e-64 248.8 144 83.3
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 4.2e-64 248.1 141 86.5
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 7.2e-64 247.3 144 83.3
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.2e-63 246.5 144 82.6
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.0e-62 243.4 144 81.9
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.4e-62 243.0 140 82.9
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.4e-59 233.0 147 76.9
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 5.4e-59 231.1 144 78.5
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 7.0e-59 230.7 143 80.4
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.6e-58 229.6 144 76.4
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.7e-58 228.8 144 75.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 5.9e-58 227.6 144 76.4
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 7.8e-58 227.3 144 77.8
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.0e-57 226.9 144 76.4
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.7e-57 226.1 144 75.7
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.7e-57 226.1 144 77.1
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 2.9e-57 225.3 144 77.1
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 3.8e-57 224.9 131 80.2
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.0e-57 224.6 144 76.4
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.0e-57 224.6 144 76.4
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 6.6e-57 224.2 141 76.6
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.1e-56 223.4 133 79.7
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.5e-56 223.0 144 77.8
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.9e-56 222.6 138 76.1
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 5.6e-56 221.1 144 73.6
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 7.3e-56 220.7 134 76.1
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 9.5e-56 220.3 143 75.5
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 9.5e-56 220.3 143 74.1
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 1.2e-55 219.9 131 79.4
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.2e-55 219.9 146 74.0
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.2e-55 219.9 141 73.0
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.6e-55 219.5 144 72.9
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.1e-55 219.2 128 82.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 2.1e-55 219.2 135 79.3
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 2.8e-55 218.8 121 83.5
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.8e-55 218.8 144 72.2
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.8e-55 218.8 131 77.9
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 3.6e-55 218.4 144 72.2
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 3.6e-55 218.4 143 74.8
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 4.7e-55 218.0 143 73.4
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 8.0e-55 217.2 119 82.4
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.0e-54 216.9 118 85.6
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.8e-54 216.1 144 74.3
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.8e-54 216.1 144 75.7
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.3e-54 215.7 144 73.6
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.0e-54 215.3 117 86.3
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 3.0e-54 215.3 146 76.0
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 4.0e-54 214.9 144 72.9
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 5.2e-54 214.5 137 75.9
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.0e-53 212.6 144 74.3
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.6e-53 212.2 127 78.0
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.6e-53 212.2 141 73.8
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 2.6e-53 212.2 144 72.2
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 2.6e-53 212.2 144 72.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.6e-53 212.2 118 83.9
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.4e-53 211.8 144 72.9
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.4e-53 211.8 144 72.9
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 3.4e-53 211.8 157 66.9
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 3.4e-53 211.8 144 72.2
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 3.4e-53 211.8 121 81.8
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.4e-53 211.5 121 80.2
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 4.4e-53 211.5 121 81.0
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 7.5e-53 210.7 143 73.4
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 7.5e-53 210.7 137 74.5
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 9.8e-53 210.3 143 69.9
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.3e-52 209.9 144 72.9
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.3e-52 209.9 120 80.8
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.7e-52 209.5 145 72.4
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 2.2e-52 209.1 144 72.9
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 2.9e-52 208.8 137 74.5
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.9e-52 208.8 144 72.9
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.7e-52 208.4 121 79.3
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 4.9e-52 208.0 126 78.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 4.9e-52 208.0 137 71.5
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 6.4e-52 207.6 120 80.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 8.3e-52 207.2 144 70.8
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 8.3e-52 207.2 143 69.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.1e-51 206.8 145 71.7
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 4.1e-51 204.9 137 70.1
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 7.0e-51 204.1 121 79.3
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 7.0e-51 204.1 146 70.5
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 9.2e-51 203.8 120 80.8
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.1e-47 192.6 118 72.9
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 4.7e-47 191.4 118 72.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 6.2e-47 191.0 131 70.2
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.4e-46 189.9 118 72.0
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.3e-46 189.1 141 67.4
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 6.8e-46 187.6 131 70.2
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 9.8e-45 183.7 120 69.2
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 2.2e-44 182.6 146 63.0
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 8.3e-44 180.6 141 57.4
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.9e-43 179.5 154 66.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 2.4e-43 179.1 146 57.5
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 7.8e-42 174.1 164 57.3
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 3.3e-40 168.7 149 53.7
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 6.8e-38 161.0 123 63.4
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 8.3e-36 154.1 119 61.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 3.2e-35 152.1 129 58.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 3.2e-35 152.1 155 49.0
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.3e-33 146.7 116 58.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 4.7e-23 111.7 83 66.3
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 4.7e-23 111.7 128 48.4
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.4e-22 110.2 83 65.1
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.4e-22 109.4 89 60.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 2.4e-22 109.4 86 64.0
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.4e-21 105.1 69 72.5
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 6.4e-20 101.3 119 44.5
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.7e-17 93.2 64 67.2
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 8.4e-12 74.3 60 65.0
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.4e-06 57.0 60 51.7


User provided reference genes

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