Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.0e-105 385.2 193 100.0
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 2.7e-82 308.9 193 81.3
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.3e-79 300.1 193 80.3
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 6.9e-78 294.3 144 100.0
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.2e-77 293.5 193 79.8
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 3.8e-76 288.5 193 77.7
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.7e-74 282.3 190 77.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 3.0e-73 278.9 175 80.6
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.8e-70 269.6 192 74.5
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 6.9e-70 267.7 185 74.1
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.8e-65 253.1 175 74.3
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.8e-65 253.1 197 69.0
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.7e-63 246.5 144 82.6
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.2e-61 240.4 197 67.5
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.0e-60 237.3 154 76.0
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.1e-59 233.8 171 72.5
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 7.2e-59 231.1 147 76.2
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 9.4e-59 230.7 149 73.8
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.2e-58 230.3 175 70.3
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.2e-58 230.3 193 65.3
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 6.1e-58 228.0 150 76.0
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 8.0e-58 227.6 184 65.8
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 8.0e-58 227.6 191 63.9
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.0e-57 227.3 144 76.4
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.4e-57 226.9 145 75.9
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 1.8e-57 226.5 150 75.3
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.8e-57 226.5 150 75.3
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 2.3e-57 226.1 151 76.8
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 3.0e-57 225.7 191 63.9
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 3.9e-57 225.3 185 64.9
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 5.2e-57 224.9 131 80.2
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.1e-56 223.8 150 72.0
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.5e-56 223.4 133 79.7
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.0e-56 223.0 193 63.2
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.0e-56 223.0 151 71.5
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 4.4e-56 221.9 151 71.5
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 4.4e-56 221.9 174 66.7
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 5.7e-56 221.5 145 73.8
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 9.7e-56 220.7 153 73.9
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.3e-55 220.3 143 75.5
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 1.7e-55 219.9 131 79.4
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.7e-55 219.9 146 74.0
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 2.2e-55 219.5 141 73.0
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.8e-55 219.2 128 82.0
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 3.7e-55 218.8 121 83.5
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 3.7e-55 218.8 135 79.3
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 6.3e-55 218.0 143 73.4
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 8.2e-55 217.6 165 68.5
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.1e-54 217.2 177 64.4
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.1e-54 217.2 119 82.4
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.4e-54 216.9 167 65.9
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.4e-54 216.9 118 85.6
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.4e-54 216.1 179 64.8
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 3.1e-54 215.7 169 67.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 4.1e-54 215.3 117 86.3
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 4.1e-54 215.3 160 71.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 4.1e-54 215.3 158 69.0
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 7.0e-54 214.5 137 75.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 7.0e-54 214.5 148 71.6
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 7.0e-54 214.5 160 66.9
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 9.1e-54 214.2 197 61.4
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.2e-53 213.8 164 67.1
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.6e-53 212.6 188 61.7
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 3.5e-53 212.2 146 73.3
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.5e-53 212.2 179 63.7
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.5e-53 212.2 179 63.7
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.5e-53 212.2 127 78.0
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 4.5e-53 211.8 157 66.9
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.5e-53 211.8 121 81.8
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.9e-53 211.5 148 72.3
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.9e-53 211.5 121 80.2
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 5.9e-53 211.5 121 81.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 7.7e-53 211.1 169 64.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 7.7e-53 211.1 177 61.6
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.0e-52 210.7 148 72.3
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.3e-52 210.3 148 71.6
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.7e-52 209.9 189 61.4
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.7e-52 209.9 120 80.8
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 2.9e-52 209.1 174 61.5
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 2.9e-52 209.1 149 71.1
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 5.0e-52 208.4 192 60.4
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.0e-52 208.4 121 79.3
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 6.5e-52 208.0 126 78.6
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 8.5e-52 207.6 120 80.0
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.1e-51 207.2 172 61.0
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.5e-51 206.8 173 61.3
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.2e-51 205.7 156 64.7
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.2e-50 203.8 120 80.8
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 6.1e-50 201.4 161 65.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 6.3e-47 191.4 118 72.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 8.3e-47 191.0 131 70.2
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 8.3e-47 191.0 145 61.4
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 7.0e-46 188.0 175 54.9
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 7.0e-46 188.0 168 58.9
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 9.1e-46 187.6 131 70.2
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 7.7e-45 184.5 203 56.7
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.3e-44 183.7 120 69.2
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 2.9e-44 182.6 146 63.0
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 1.1e-43 180.6 141 57.4
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 3.2e-43 179.1 146 57.5
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 1.4e-41 173.7 200 52.5
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 5.2e-41 171.8 152 53.9
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 5.4e-38 161.8 134 59.0
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.1e-35 154.1 119 61.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 4.2e-35 152.1 129 58.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 4.2e-35 152.1 155 49.0
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.8e-33 146.7 116 58.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 6.4e-23 111.7 84 65.5
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 6.4e-23 111.7 128 48.4
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.4e-22 110.5 99 63.6
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 3.2e-22 109.4 89 60.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 5.4e-22 108.6 109 54.1
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 6.0e-21 105.1 69 72.5
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 8.6e-20 101.3 119 44.5
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.5e-16 90.5 87 55.2
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 7.8e-13 78.2 105 48.6
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.9e-06 57.0 60 51.7


User provided reference genes

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