Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 1.6e-45 186.0 116 100.0
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 4.7e-29 131.3 118 64.4
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 6.1e-29 131.0 117 71.8
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 1.7e-26 122.9 118 66.1
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 3.1e-25 118.6 116 57.8
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 4.5e-24 114.8 116 56.9
Psat7g034120 Pisum sativum HOM05D007326 ORTHO05D009048 1.2e-21 106.7 101 71.3
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 2.1e-21 105.9 117 68.4
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 2.3e-20 102.4 116 51.7
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 4.8e-18 94.7 117 59.0
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 7.0e-17 90.9 111 62.2
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 9.1e-17 90.5 107 59.8
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 7.2e-14 80.9 116 61.2
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 3.0e-12 75.5 121 43.8
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 6.8e-12 74.3 95 46.3
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 6.8e-12 74.3 121 43.0
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 6.8e-12 74.3 121 43.0
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 2.0e-11 72.8 118 39.8
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 7.5e-11 70.9 117 49.6
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 9.8e-11 70.5 112 53.6
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 1.7e-10 69.7 98 55.1
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 1.7e-10 69.7 98 45.9
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 2.2e-10 69.3 115 43.5
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 2.8e-10 68.9 96 62.5
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 2.8e-10 68.9 30 93.3
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 2.8e-10 68.9 30 93.3
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 3.7e-10 68.6 104 46.2
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 3.7e-10 68.6 97 52.6
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 4.8e-10 68.2 99 40.4
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 8.3e-10 67.4 30 90.0
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 8.3e-10 67.4 30 90.0
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 8.3e-10 67.4 96 58.3
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 1.1e-09 67.0 116 40.5
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 1.1e-09 67.0 30 93.3
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 1.4e-09 66.6 30 90.0
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 1.4e-09 66.6 28 100.0
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 1.8e-09 66.2 30 86.7
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.8e-09 66.2 30 90.0
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.8e-09 66.2 30 90.0
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 1.8e-09 66.2 30 90.0
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 1.8e-09 66.2 30 90.0
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 3.1e-09 65.5 30 86.7
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 3.1e-09 65.5 30 86.7
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 3.1e-09 65.5 110 37.3
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 3.1e-09 65.5 30 86.7
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 3.1e-09 65.5 87 44.8
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 3.1e-09 65.5 30 86.7
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 5.4e-09 64.7 30 86.7
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 5.4e-09 64.7 106 43.4
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 7.0e-09 64.3 30 86.7
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 7.0e-09 64.3 87 43.7
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 7.0e-09 64.3 104 39.4
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 7.0e-09 64.3 30 86.7
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 7.0e-09 64.3 30 86.7
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 86.7
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 83.3
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 9.1e-09 63.9 101 39.6
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 9.1e-09 63.9 30 90.0
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 1.2e-08 63.5 117 38.5
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.2e-08 63.5 30 86.7
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 1.6e-08 63.2 103 52.4
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 2.0e-08 62.8 30 86.7
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 2.0e-08 62.8 30 86.7
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 2.7e-08 62.4 30 83.3
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 2.7e-08 62.4 30 80.0
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 2.7e-08 62.4 30 80.0
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 2.7e-08 62.4 30 80.0
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 2.7e-08 62.4 30 80.0
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 3.5e-08 62.0 30 86.7
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 3.5e-08 62.0 125 48.8
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 4.5e-08 61.6 95 49.5
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 5.9e-08 61.2 112 35.7
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 5.9e-08 61.2 29 86.2
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 7.7e-08 60.8 106 50.0
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 7.7e-08 60.8 120 50.8
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 1.0e-07 60.5 29 86.2
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 1.0e-07 60.5 123 40.7
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 1.3e-07 60.1 117 50.4
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 1.3e-07 60.1 121 44.6
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.3e-07 60.1 123 39.8
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 2.3e-07 59.3 30 80.0
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.8e-07 58.5 120 50.0
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 5.0e-07 58.2 106 46.2
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 5.0e-07 58.2 26 84.6
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 6.6e-07 57.8 26 88.5
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 6.6e-07 57.8 85 38.8
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 1.5e-06 56.6 119 38.7
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 1.5e-06 56.6 30 80.0
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 1.5e-06 56.6 30 80.0
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 1.9e-06 56.2 29 79.3
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 2.5e-06 55.8 28 82.1
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 3.3e-06 55.5 116 34.5
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 4.2e-06 55.1 111 37.8
HPP92_020021 Vanilla planifolia HOM05D007326 ORTHO05D009048 4.2e-06 55.1 30 76.7
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 9.5e-06 53.9 114 36.0


User provided reference genes

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