Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.9e-104 382.5 186 100.0
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.5e-82 309.7 168 84.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 7.6e-82 307.4 169 85.2
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 5.3e-75 284.6 171 79.5
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 2.2e-73 279.3 171 79.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.2e-72 275.4 170 79.4
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 5.5e-72 274.6 172 78.5
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.0e-70 270.4 170 77.1
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.3e-70 269.2 171 77.2
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.1e-67 260.4 163 79.1
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.4e-67 260.0 161 77.6
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 1.8e-67 259.6 163 77.3
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.4e-67 259.2 161 77.0
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 2.4e-67 259.2 158 79.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 9.0e-67 257.3 160 78.1
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.2e-66 256.9 167 74.3
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 2.0e-66 256.1 152 80.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 5.9e-66 254.6 162 77.8
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 7.7e-66 254.2 158 76.6
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 7.7e-66 254.2 152 79.6
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.7e-65 253.1 163 76.1
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 3.8e-65 251.9 165 73.3
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 3.8e-65 251.9 160 76.2
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 3.8e-65 251.9 161 75.2
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.1e-64 250.4 165 73.9
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 2.5e-64 249.2 152 78.9
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.5e-64 249.2 152 77.0
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 2.5e-64 249.2 162 74.1
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 2.5e-64 249.2 162 75.9
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 3.2e-64 248.8 159 74.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.2e-64 248.8 162 73.5
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.2e-64 248.4 161 75.8
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 4.2e-64 248.4 161 73.9
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 4.2e-64 248.4 161 74.5
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 5.5e-64 248.1 161 73.9
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 7.2e-64 247.7 160 75.0
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 9.4e-64 247.3 161 74.5
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 9.4e-64 247.3 152 77.6
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 9.4e-64 247.3 161 73.9
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.2e-63 246.9 152 76.3
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.6e-63 246.5 162 74.1
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.6e-63 246.5 176 70.5
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.1e-63 246.1 145 80.0
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 2.1e-63 246.1 171 71.3
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 2.1e-63 246.1 168 72.0
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 2.1e-63 246.1 162 74.1
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.1e-63 246.1 161 73.3
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 3.6e-63 245.4 161 73.9
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 4.6e-63 245.0 162 74.7
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 4.6e-63 245.0 158 74.7
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 4.6e-63 245.0 163 74.2
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 6.1e-63 244.6 167 71.9
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 6.1e-63 244.6 162 73.5
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 6.1e-63 244.6 159 73.6
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 6.1e-63 244.6 157 76.4
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 6.1e-63 244.6 152 75.0
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 1.0e-62 243.8 171 71.3
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.0e-62 243.8 163 71.8
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.4e-62 243.4 166 73.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.4e-62 243.4 164 70.7
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-62 243.0 162 73.5
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-62 243.0 162 73.5
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.8e-62 243.0 161 74.5
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.8e-62 243.0 161 72.7
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.8e-62 243.0 163 71.8
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.8e-62 243.0 152 75.7
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.8e-62 243.0 162 74.1
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 2.3e-62 242.7 158 74.7
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 3.0e-62 242.3 164 70.7
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 5.1e-62 241.5 162 74.1
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.7e-62 241.1 152 76.3
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.7e-62 241.1 152 76.3
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 8.8e-62 240.7 161 72.7
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.1e-61 240.4 163 71.2
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 1.1e-61 240.4 161 73.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 2.0e-61 239.6 152 73.7
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.5e-61 239.2 165 70.9
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.5e-61 239.2 145 77.9
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 3.3e-61 238.8 164 71.3
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 4.3e-61 238.4 162 72.2
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 5.7e-61 238.0 164 70.1
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 7.4e-61 237.7 151 73.5
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 7.4e-61 237.7 145 77.9
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 9.7e-61 237.3 168 71.4
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 2.2e-60 236.1 165 69.7
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.2e-60 236.1 167 70.1
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 2.2e-60 236.1 155 72.9
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.1e-59 233.8 167 69.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.8e-59 233.0 167 68.9
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.4e-59 232.6 164 70.1
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 3.1e-59 232.3 162 70.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.2e-58 230.3 161 70.2
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 4.5e-58 228.4 161 68.9
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 7.7e-58 227.6 151 72.2
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.0e-57 227.3 187 62.6
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 4.2e-56 221.9 163 68.7
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 5.5e-56 221.5 145 73.1
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 5.5e-56 221.5 145 73.1
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 7.2e-56 221.1 137 74.5
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 7.2e-56 221.1 137 74.5
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.4e-56 220.7 140 78.6
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 1.2e-55 220.3 160 70.6
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.2e-55 220.3 145 73.1
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.7e-55 218.4 145 72.4
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.0e-54 217.2 153 69.9
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.3e-53 212.2 161 65.8
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 5.7e-53 211.5 192 57.3
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 4.5e-50 201.8 149 66.4
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.7e-49 199.9 145 65.5
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 3.8e-49 198.7 162 64.8
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 1.4e-48 196.8 134 71.6
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.9e-48 196.4 152 62.5
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.7e-47 192.6 174 58.0
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.5e-45 186.8 119 73.1
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 3.3e-45 185.7 152 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 4.8e-44 181.8 147 61.9
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 2.4e-43 179.5 124 71.0
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 7.2e-40 167.9 144 59.7
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.5e-34 148.7 145 57.2
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 2.5e-32 142.9 87 77.0
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 6.1e-31 138.3 94 71.3
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 1.4e-30 137.1 199 43.7
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.3e-25 120.6 82 74.4
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.3e-20 104.0 66 74.2
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.7e-18 96.3 66 65.2
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 5.9e-18 95.1 77 57.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.5e-16 90.5 65 63.1
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.4e-14 84.0 104 47.1
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 9.8e-13 77.8 45 71.1
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 2.3e-09 66.6 42 73.8
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.6e-09 65.1 143 33.6
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 2.5e-08 63.2 86 39.5
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.7e-07 58.9 82 43.9


User provided reference genes

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