Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 3.6e-301 1037.3 484 100.0
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 7.6e-267 923.3 492 87.8
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 3.1e-260 901.4 487 87.7
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 3.3e-238 828.2 502 78.7
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 1.8e-236 822.4 499 78.6
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 7.0e-236 820.5 426 86.6
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 5.9e-235 817.4 491 77.8
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 2.2e-234 815.5 491 77.4
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 6.5e-234 813.9 481 78.0
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 4.4e-230 801.2 474 78.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 1.4e-228 796.2 468 78.0
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 3.2e-225 785.0 443 79.9
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.6e-224 782.7 468 77.1
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 2.1e-224 782.3 483 76.0
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 2.7e-224 781.9 439 80.4
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 4.0e-223 778.1 443 77.9
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 7.5e-222 773.9 497 72.2
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.7e-221 772.7 426 81.7
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 2.8e-221 771.9 435 80.7
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 4.1e-220 768.1 504 71.2
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 2.0e-219 765.8 448 78.6
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.0e-218 763.5 473 74.2
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 2.3e-218 762.3 423 78.7
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 2.9e-218 761.9 497 71.6
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.1e-217 760.0 426 78.4
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 3.2e-217 758.4 487 71.7
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 5.5e-217 757.7 431 79.4
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 9.5e-217 756.9 479 74.3
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 1.6e-216 756.1 423 80.6
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 3.6e-216 755.0 423 78.7
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 8.0e-216 753.8 495 70.1
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.0e-215 751.5 423 78.3
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 5.2e-215 751.1 460 73.5
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 8.8e-215 750.4 423 78.3
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 3.4e-214 748.4 474 73.8
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 3.4e-214 748.4 474 73.8
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.4e-214 748.0 426 78.4
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 7.5e-214 747.3 423 79.0
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 1.7e-213 746.1 476 71.8
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.2e-213 745.7 503 71.2
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 2.8e-213 745.3 423 79.0
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 1.1e-212 743.4 492 69.1
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.0e-211 739.2 498 69.7
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 5.9e-211 737.6 521 67.9
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 5.9e-211 737.6 488 69.9
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 7.8e-211 737.3 491 69.5
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.7e-210 736.1 423 76.8
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 2.3e-210 735.7 423 77.1
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 2.9e-210 735.3 447 73.8
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.9e-210 735.3 426 76.8
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 2.9e-210 735.3 472 71.4
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 5.0e-210 734.6 477 70.4
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 1.1e-209 733.4 423 77.5
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 1.9e-209 732.6 423 76.8
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 3.3e-209 731.9 426 76.1
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 7.3e-209 730.7 423 77.3
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.6e-208 729.6 492 69.3
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 1.6e-208 729.6 423 75.9
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 2.1e-208 729.2 478 71.5
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.8e-208 728.8 425 75.5
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 4.7e-208 728.0 380 86.3
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 4.7e-208 728.0 380 86.3
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 8.0e-208 727.2 424 74.8
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.8e-207 726.1 425 74.8
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 3.0e-207 725.3 425 74.6
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 3.0e-207 725.3 439 73.1
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 3.0e-207 725.3 424 74.5
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 4.0e-207 724.9 423 76.4
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 6.8e-207 724.2 423 76.8
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 2.6e-206 722.2 425 76.5
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 2.6e-206 722.2 423 75.4
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 5.7e-206 721.1 454 72.7
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 2.2e-205 719.2 426 74.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 2.2e-205 719.2 426 74.4
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 3.7e-205 718.4 424 73.8
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 8.3e-205 717.2 428 75.2
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.1e-204 714.9 440 73.2
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 7.0e-204 714.1 424 74.3
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 1.2e-203 713.4 482 67.2
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 1.6e-203 713.0 442 74.7
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 1.6e-203 713.0 424 75.0
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.6e-203 711.4 427 74.0
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 1.0e-202 710.3 420 76.0
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 1.7e-202 709.5 423 74.0
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 6.6e-202 707.6 424 74.8
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.5e-201 705.7 424 74.5
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.4e-199 699.9 473 68.9
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 3.1e-199 698.7 380 84.5
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 6.8e-199 697.6 484 66.7
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 3.5e-195 685.3 423 71.2
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 5.0e-194 681.4 423 72.3
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.3e-193 678.3 423 69.7
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.2e-192 676.8 430 70.0
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 2.1e-187 659.4 364 79.4
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 7.8e-187 657.5 426 73.7
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 1.3e-186 656.8 508 60.2
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.3e-186 656.8 425 73.2
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 8.6e-186 654.1 460 66.5
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 9.5e-185 650.6 378 76.5
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.6e-184 648.7 423 66.7
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 4.0e-183 645.2 444 68.0
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 2.2e-181 639.4 364 77.5
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 5.4e-180 634.8 422 69.2
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.5e-174 616.7 349 77.9
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 7.8e-171 604.4 351 77.5
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 7.8e-171 604.4 426 66.9
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.1e-169 600.5 424 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 2.6e-166 589.3 417 63.5
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 9.9e-166 587.4 427 68.4
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 6.4e-165 584.7 325 79.1
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 1.1e-164 583.9 408 68.1
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 4.6e-163 578.6 518 55.2
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 1.5e-161 573.5 424 60.8
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.5e-161 573.5 427 61.1
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 4.9e-149 531.9 426 57.3
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 2.6e-142 509.6 396 56.6
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 3.6e-139 499.2 321 69.2
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 1.5e-134 483.8 427 55.0
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 3.2e-132 476.1 269 78.1
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.3e-121 439.5 247 80.2
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 1.7e-101 374.0 455 42.6
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 4.7e-99 365.9 218 72.5
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-81 307.8 183 73.8
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 6.8e-74 282.3 162 78.4
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 6.8e-74 282.3 422 41.5
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.5e-62 243.4 148 70.3
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 7.8e-62 242.3 156 75.0
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.9e-60 237.7 374 36.9
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.4e-58 230.7 174 66.7
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 3.5e-54 216.9 110 84.5
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.3e-51 208.4 118 78.8
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.9e-48 197.2 148 56.1
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 3.3e-44 183.7 110 72.7
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.9e-40 170.6 184 48.4
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 3.1e-34 150.6 98 67.3
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 3.4e-33 147.1 191 44.0
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 1.7e-19 101.7 60 70.0
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.4e-18 98.6 61 68.9
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 4.7e-06 57.0 41 56.1


User provided reference genes

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