Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.0e-185 653.3 344 100.0
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 6.4e-143 511.1 326 87.7
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.7e-133 479.2 345 80.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 4.9e-127 458.4 309 78.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 3.2e-126 455.7 309 77.7
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.1e-125 453.0 312 78.8
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 3.3e-123 445.7 310 79.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.1e-121 440.7 318 77.4
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 3.1e-121 439.1 331 74.6
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.0e-116 422.5 325 73.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.1e-115 420.6 329 71.4
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 3.3e-115 419.1 311 72.3
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.7e-115 418.3 330 70.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 7.4e-115 417.9 363 67.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.6e-114 416.8 310 72.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 4.8e-114 415.2 283 78.4
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 8.2e-114 414.5 326 70.6
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.1e-113 414.1 314 73.6
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.4e-113 412.9 280 77.1
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.4e-113 412.9 280 77.1
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.4e-113 412.9 302 75.2
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 5.3e-113 411.8 280 76.8
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 6.9e-113 411.4 330 68.5
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 9.0e-113 411.0 303 72.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.0e-112 409.8 268 80.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.6e-112 409.5 321 70.7
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 3.4e-112 409.1 326 68.1
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 3.4e-112 409.1 331 68.3
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.5e-112 408.7 268 79.5
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.0e-111 407.5 268 79.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.2e-111 406.4 280 77.9
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 2.9e-111 406.0 309 72.8
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.9e-111 406.0 310 72.3
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.8e-111 405.6 320 70.6
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 6.5e-111 404.8 271 78.2
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 8.5e-111 404.4 326 69.9
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.1e-110 404.1 313 71.2
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.5e-110 402.9 306 71.2
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 7.2e-110 401.4 269 77.7
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.6e-109 400.2 260 78.1
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.7e-109 399.4 327 69.4
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.7e-109 399.4 324 69.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 7.9e-109 397.9 269 77.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 7.9e-109 397.9 281 74.4
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.0e-108 397.5 328 68.6
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.0e-108 397.5 279 81.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.0e-108 397.5 307 70.0
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.4e-108 397.1 327 69.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 2.3e-108 396.4 329 66.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.9e-108 395.6 261 80.1
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.1e-107 394.0 260 78.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.5e-107 393.7 321 68.2
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 5.7e-107 391.7 298 69.5
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 2.8e-106 389.4 310 71.0
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.8e-106 389.4 317 68.1
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 4.8e-106 388.7 321 66.0
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.2e-106 387.9 300 69.0
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.4e-105 386.3 321 66.4
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.1e-105 385.6 309 68.3
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 4.1e-105 385.6 262 76.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 6.9e-105 384.8 318 67.9
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.2e-104 384.0 300 69.3
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.5e-104 383.6 249 79.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.3e-103 380.6 287 71.4
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.7e-103 380.2 302 69.2
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-103 380.2 291 70.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.2e-103 379.8 293 68.6
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.9e-103 379.4 266 75.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.4e-102 377.1 295 70.2
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 3.2e-102 375.9 250 79.6
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.2e-102 375.9 295 68.1
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 3.2e-102 375.9 288 68.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 4.7e-101 372.1 309 67.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 6.1e-101 371.7 298 66.4
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.0e-100 370.9 317 67.2
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.0e-100 370.9 295 69.5
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.4e-100 370.5 265 74.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.8e-100 370.2 261 73.6
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 3.0e-100 369.4 269 73.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.0e-100 369.4 238 80.7
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.9e-100 369.0 259 74.9
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.3e-99 365.9 315 63.5
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 7.4e-99 364.8 277 70.4
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 3.1e-97 359.4 236 78.4
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.6e-96 356.3 299 66.2
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.2e-95 353.2 279 71.3
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.2e-93 347.4 307 62.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.1e-93 346.7 250 74.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.1e-91 340.9 316 61.1
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.5e-91 340.5 317 60.3
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.7e-88 329.7 277 64.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.9e-87 326.2 221 75.6
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 5.0e-87 325.5 236 72.5
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.1e-86 324.3 260 67.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.0e-84 317.8 235 68.5
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 2.7e-80 303.1 216 69.0
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.3e-79 300.8 255 67.1
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.2e-78 295.0 200 76.0
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.0e-76 291.2 215 70.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.9e-71 273.1 260 55.0
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 8.0e-69 265.0 248 62.1
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.0e-68 264.6 261 53.6
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.4e-67 259.2 264 52.3
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.5e-62 241.5 277 45.8
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.0e-59 233.8 249 52.2
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.5e-59 231.9 251 50.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.3e-58 228.4 253 47.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.7e-56 223.4 253 49.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.6e-53 213.0 129 85.3
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.0e-44 183.0 252 38.9
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 3.2e-41 173.3 125 72.8
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.1e-40 170.6 249 42.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.2e-37 159.1 123 69.9
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 8.1e-37 158.7 246 37.4
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 5.6e-22 109.4 290 35.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.8e-19 99.4 254 29.5
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 6.7e-07 59.3 32 93.8
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.3e-06 56.6 52 57.7


User provided reference genes

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