Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1564.7 804 100.0
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1386.3 835 85.7
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1378.2 834 86.8
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1356.7 838 85.9
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1332.8 838 84.1
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1327.4 838 83.7
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1321.6 778 86.2
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1311.6 836 82.5
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1307.0 837 83.0
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1305.8 837 82.1
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1305.0 830 81.8
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1292.3 830 81.4
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1283.9 843 79.0
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1279.6 838 79.7
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1277.3 872 73.4
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1271.9 836 80.5
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1261.5 838 80.2
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1256.9 837 77.9
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1245.3 834 78.4
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1238.0 853 76.6
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 835 76.6
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1233.0 843 76.5
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1232.2 839 76.8
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1231.5 839 77.0
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1230.3 832 77.0
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1229.2 848 76.1
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1227.2 818 78.9
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1226.1 840 76.9
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1223.8 836 76.8
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1221.8 834 76.6
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1221.1 822 77.6
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1219.9 842 77.1
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1219.9 846 75.9
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1218.8 838 76.3
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1218.0 848 75.7
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1215.3 832 76.6
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1214.1 836 76.3
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1213.0 849 75.4
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1211.8 849 75.4
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1208.7 846 75.8
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1208.4 837 76.8
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1205.3 830 75.9
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1201.8 896 71.9
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1199.9 846 75.4
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1199.5 838 75.3
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1192.6 835 75.8
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1192.2 835 75.8
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1191.8 831 75.6
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1188.7 791 79.8
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1188.3 832 74.5
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1187.6 835 75.6
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1187.6 852 73.0
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1185.2 836 74.5
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1184.5 851 74.6
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1184.5 824 75.7
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1184.1 852 73.0
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 852 74.1
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1182.9 834 74.9
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1180.2 835 75.1
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1179.9 828 74.9
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 806 76.1
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1173.3 824 75.2
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1172.5 819 75.0
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1172.5 827 74.6
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1171.0 836 73.8
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1169.8 820 74.6
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1168.3 813 75.8
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1167.1 832 73.6
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1165.6 869 72.2
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1162.9 819 74.5
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1161.4 822 74.9
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1160.2 819 74.4
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1159.1 816 75.0
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1157.9 860 71.5
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1157.1 815 75.3
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1156.4 811 75.6
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1151.7 814 75.4
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1151.7 759 80.6
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1150.6 829 73.5
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1150.2 830 73.3
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1149.0 818 74.9
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1148.7 814 73.8
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1147.9 826 73.6
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1147.9 802 74.8
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1147.1 832 73.2
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1145.2 807 75.1
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1144.0 825 74.9
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1143.6 793 76.5
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1142.5 813 74.8
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1142.1 813 74.4
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1142.1 813 74.4
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1142.1 786 76.0
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1142.1 819 74.5
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1141.7 819 74.5
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1141.3 838 74.1
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1140.9 818 74.7
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 818 74.3
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 818 74.3
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 818 74.3
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 818 74.3
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1139.4 811 75.3
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1138.6 837 71.7
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1136.3 810 74.7
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1135.6 876 68.2
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1134.0 829 72.9
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1132.9 822 73.7
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1132.5 835 73.7
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1131.3 797 74.0
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1127.1 813 73.1
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1125.5 793 75.5
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1125.5 815 72.6
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1124.8 793 75.4
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1121.3 818 71.8
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1118.6 813 73.2
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1118.2 828 70.5
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1115.5 825 70.5
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1115.5 811 72.1
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1109.7 710 81.0
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1109.0 848 70.3
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1100.9 821 73.3
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 811 71.4
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 796 72.1
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1095.5 759 77.3
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1094.7 863 70.1
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1094.3 846 70.2
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1094.0 822 66.5
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1090.9 820 70.9
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 3.8e-311 1071.2 821 71.4
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 1.2e-309 1066.2 777 71.7
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 3.3e-307 1058.1 756 72.5
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 8.1e-306 1053.5 814 70.5
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 2.6e-304 1048.5 855 67.3
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 1.3e-303 1046.2 791 70.3
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 2.2e-303 1045.4 810 70.0
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 1.5e-299 1032.7 756 72.6
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 1.9e-299 1032.3 809 67.7
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 1.5e-296 1022.7 880 63.9
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 1.7e-295 1019.2 815 66.9
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 5.1e-292 1007.7 814 66.3
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 4.0e-289 998.0 818 66.3
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 4.9e-287 991.1 735 74.3
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 4.8e-274 948.0 779 67.4
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.4e-265 919.1 773 66.0
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 3.7e-234 815.5 591 70.2
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 1.6e-229 800.0 618 64.9
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 1.1e-222 777.3 552 76.6
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.3e-215 753.8 521 74.1
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 3.1e-212 742.7 549 68.7
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.4e-179 632.9 651 56.7
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 8.0e-144 515.4 359 81.3
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 3.0e-135 486.9 307 76.5
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 1.4e-124 451.4 409 58.4
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 7.3e-113 412.5 317 76.3
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.3e-105 387.1 340 61.5
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 4.9e-101 373.2 261 68.2
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.7e-91 340.9 525 49.1
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 1.4e-71 275.4 151 86.8
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 2.3e-58 231.5 153 77.1
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 5.3e-31 140.6 76 86.8
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 4.2e-28 131.0 68 92.6
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 5.5e-28 130.6 73 80.8
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 2.1e-27 128.6 435 28.5
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 6.3e-24 117.1 96 64.6
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.1e-20 106.3 114 50.9
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 2.5e-20 105.1 246 33.7
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 5.5e-20 104.0 200 35.0
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 7.2e-20 103.6 106 53.8
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 5.7e-17 94.0 220 33.2
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 7.5e-17 93.6 417 26.4
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 1.7e-16 92.4 137 42.3
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 7.7e-14 83.6 232 28.0
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 5.0e-13 80.9 327 26.3
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 8.5e-13 80.1 78 55.1
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 8.3e-08 63.5 70 47.1
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 1.8e-07 62.4 48 66.7


User provided reference genes

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