Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.6e-197 691.8 342 100.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.8e-182 642.5 342 92.7
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.8e-177 625.9 342 90.1
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 7.5e-176 620.5 343 89.5
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.7e-167 592.8 334 84.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.2e-165 586.6 334 84.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 6.6e-164 580.9 334 83.5
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 3.6e-162 575.1 334 82.3
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 8.0e-162 573.9 324 87.0
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.1e-154 549.3 330 80.3
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 4.7e-154 548.1 330 80.3
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.1e-150 535.0 336 75.3
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.3e-148 530.0 333 78.1
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.2e-146 521.2 329 75.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 6.2e-146 521.2 329 74.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.0e-145 518.5 329 74.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.5e-144 516.5 329 73.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.6e-144 515.8 329 73.9
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.4e-144 515.0 329 74.2
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.1e-142 508.4 329 73.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.4e-142 508.1 326 73.9
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 2.1e-141 506.1 329 74.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.7e-141 505.8 329 71.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.0e-141 504.6 321 74.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 7.8e-141 504.2 327 73.7
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 7.8e-141 504.2 330 72.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.0e-140 503.8 329 71.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-140 503.4 329 71.1
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-140 503.4 328 73.2
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.7e-140 503.1 331 71.3
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.6e-140 501.1 329 71.1
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 8.6e-140 500.7 328 73.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.3e-139 498.4 329 73.6
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.8e-138 495.7 329 71.4
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-137 493.8 327 71.6
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.8e-137 493.0 328 70.1
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.2e-136 490.3 325 72.9
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.3e-135 486.9 325 69.8
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.9e-135 485.7 339 70.2
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.9e-135 485.7 319 72.1
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 6.4e-135 484.6 330 70.3
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.1e-134 483.8 323 70.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.1e-134 483.8 332 69.6
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.1e-134 483.8 331 69.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.4e-134 481.5 326 69.3
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 9.2e-134 480.7 329 70.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.2e-133 480.3 319 72.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 3.5e-133 478.8 319 70.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.7e-132 476.5 332 68.1
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.3e-132 476.1 322 69.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 5.1e-132 474.9 322 69.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.5e-131 473.4 322 68.3
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 4.3e-131 471.9 325 69.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.2e-130 470.3 318 70.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.6e-130 468.8 322 69.3
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 3.6e-130 468.8 322 69.6
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.4e-129 466.8 326 68.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.0e-129 465.3 322 68.9
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 9.0e-129 464.2 334 65.9
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-127 459.5 322 68.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.9e-126 456.4 324 67.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 5.4e-126 454.9 329 67.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 7.1e-126 454.5 319 68.7
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.5e-125 452.2 325 67.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.0e-124 449.1 299 69.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.6e-123 444.9 323 66.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 3.6e-122 442.2 330 64.5
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.6e-122 442.2 329 67.5
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 4.8e-122 441.8 333 64.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.1e-121 440.7 322 65.8
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.1e-121 439.1 322 65.8
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.3e-121 438.3 323 66.6
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 4.5e-120 435.3 324 65.1
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.5e-120 435.3 323 64.7
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.5e-120 435.3 323 64.7
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 9.9e-120 434.1 322 64.0
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.3e-119 433.7 323 64.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.3e-119 433.7 323 64.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.3e-119 433.7 323 64.1
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 3.8e-119 432.2 326 64.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 6.4e-119 431.4 323 63.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.4e-119 431.4 322 65.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 8.4e-119 431.0 327 63.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.7e-117 426.0 323 63.8
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.5e-117 425.6 315 65.4
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.0e-116 424.1 327 62.7
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.4e-113 412.9 316 62.0
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 4.6e-109 398.7 330 60.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.6e-104 382.9 320 59.1
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 3.3e-99 365.9 308 58.4
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.8e-97 360.1 309 57.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 5.9e-96 355.1 318 57.5
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.0e-95 354.4 286 61.2
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.5e-86 322.0 206 71.4
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.0e-84 316.2 318 50.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-83 313.2 311 52.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-82 310.5 309 52.1
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.1e-81 304.7 245 63.3
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.5e-78 295.4 203 67.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 8.0e-77 291.6 207 69.6
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.6e-67 260.0 158 77.2
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 3.7e-66 256.1 202 61.9
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.1e-62 244.6 182 62.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.1e-62 244.6 163 70.6
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.0e-55 221.5 133 75.2
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.1e-53 212.2 159 64.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-51 206.8 285 44.2
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.4e-51 206.1 250 48.0
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.3e-46 189.9 140 67.1
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.2e-44 182.6 125 72.0
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.6e-40 169.5 139 62.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.6e-37 161.0 89 79.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-25 121.7 130 49.2
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.2e-25 118.6 121 52.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.1e-20 103.6 177 38.4
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-17 94.7 72 58.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.8e-12 77.8 119 37.8
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.5e-11 74.7 70 55.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.7e-08 63.9 132 34.1
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.9e-06 57.8 214 29.9
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 4.3e-06 56.6 216 29.6


User provided reference genes

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