Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 1.9e-119 432.6 226 100.0
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 9.8e-100 367.1 226 86.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 6.6e-96 354.4 227 84.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 8.1e-94 347.4 228 83.3
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 3.9e-88 328.6 225 76.9
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 3.9e-88 328.6 225 76.9
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.5e-87 325.9 228 78.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.2e-86 323.6 227 77.5
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.3e-80 302.8 229 73.8
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.7e-75 286.6 226 69.0
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 6.4e-75 284.6 226 68.6
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.0e-72 275.8 235 63.4
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 3.3e-71 272.3 186 72.6
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 2.8e-70 269.2 221 63.8
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 2.8e-70 269.2 235 63.0
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.1e-69 267.3 227 63.9
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 6.9e-69 264.6 223 62.3
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 9.0e-69 264.2 209 66.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 3.4e-68 262.3 227 62.6
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 4.9e-67 258.5 220 60.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.2e-66 255.8 249 57.0
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 7.1e-66 254.6 222 60.4
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 4.6e-65 251.9 218 61.5
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 6.0e-65 251.5 208 62.5
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.3e-64 250.4 242 57.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 6.7e-64 248.1 229 58.5
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 1.1e-63 247.3 192 66.7
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.5e-63 246.9 191 66.5
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 9.6e-63 244.2 198 64.1
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.3e-62 243.8 251 55.8
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.6e-62 243.4 194 66.5
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.6e-62 243.4 248 55.2
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.8e-62 242.7 229 58.5
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 8.1e-62 241.1 192 64.6
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.8e-61 240.0 192 63.5
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.4e-61 239.6 183 68.3
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 4.0e-61 238.8 202 61.9
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 5.3e-61 238.4 231 58.9
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 9.0e-61 237.7 208 58.2
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 1.2e-60 237.3 189 62.4
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.5e-60 236.9 228 55.7
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.6e-60 236.1 222 57.2
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.4e-60 235.7 243 53.9
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.8e-60 235.0 187 64.2
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.0e-59 234.2 215 59.1
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 4.9e-59 231.9 202 61.9
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 1.1e-58 230.7 206 63.1
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 5.5e-58 228.4 212 59.4
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 2.1e-57 226.5 187 62.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 2.1e-57 226.5 189 60.8
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 3.5e-57 225.7 203 58.6
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.5e-57 225.7 189 60.3
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 3.5e-57 225.7 230 54.3
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 6.0e-57 224.9 234 54.7
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 7.9e-57 224.6 198 58.6
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.0e-56 222.6 196 58.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 3.0e-56 222.6 214 58.4
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 3.9e-56 222.2 240 55.4
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 8.7e-56 221.1 207 61.4
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 8.7e-56 221.1 191 60.2
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.9e-55 219.9 192 59.9
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.9e-55 219.9 163 65.6
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.3e-55 219.2 219 55.3
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 3.3e-55 219.2 233 51.5
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 9.6e-55 217.6 219 55.3
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.3e-54 217.2 219 54.8
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.6e-54 216.9 219 54.8
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.8e-54 216.1 228 53.5
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 4.8e-54 215.3 229 52.8
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 4.8e-54 215.3 222 53.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.4e-53 213.8 217 57.1
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 2.4e-53 213.0 219 54.3
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.4e-53 213.0 219 53.4
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 6.9e-53 211.5 123 86.2
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.5e-52 210.3 211 54.0
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.2e-51 206.5 171 59.1
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.6e-49 200.3 161 64.0
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 6.1e-49 198.4 177 56.5
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.0e-48 197.6 205 54.1
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.8e-48 196.8 171 60.8
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.3e-46 190.7 143 65.7
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.8e-46 188.7 271 44.6
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 6.3e-46 188.3 219 51.6
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.0e-44 183.3 171 52.6
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.4e-44 182.6 171 52.0
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 4.5e-44 182.2 223 49.3
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.4e-42 177.2 210 50.0
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 5.1e-40 168.7 172 50.0
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 1.3e-38 164.1 230 43.0
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 6.3e-38 161.8 134 60.4
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.2e-36 157.5 172 46.5
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.2e-36 157.5 147 57.8
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.0e-35 154.5 188 44.7
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 3.8e-35 152.5 170 44.7
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.6e-33 146.0 130 58.5
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.8e-32 143.7 169 46.2
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.2e-30 136.7 134 51.5
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 2.6e-28 129.8 98 64.3
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.5e-27 124.8 89 69.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 6.1e-25 118.6 89 65.2
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.3e-22 110.9 114 50.9
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 2.4e-21 106.7 97 57.7
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 7.7e-20 101.7 95 53.7
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 6.5e-19 98.6 219 33.8
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.8e-11 72.8 54 61.1
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 1.3e-06 57.8 45 57.8
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 3.7e-06 56.2 62 51.6


User provided reference genes

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