Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 0.0e+00 1324.3 684 100.0
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.2e-221 771.5 685 65.5
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 8.9e-221 770.8 692 65.3
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.3e-208 730.3 665 63.2
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 2.6e-172 609.8 687 55.7
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 7.4e-167 591.7 732 53.1
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.3e-166 590.9 650 56.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 5.3e-165 585.5 709 54.0
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.4e-152 544.3 690 50.9
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 8.3e-150 535.0 671 53.1
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.6e-140 504.2 668 48.4
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.1e-138 498.0 642 48.8
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.1e-137 493.8 606 52.3
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.1e-133 479.6 637 48.7
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.9e-131 473.0 657 47.2
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.9e-126 456.8 687 46.1
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 7.8e-124 448.7 687 45.6
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.7e-115 421.0 645 44.5
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 3.1e-112 410.2 626 46.0
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 4.2e-101 373.2 628 43.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.1e-100 370.9 569 43.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.0e-99 368.6 633 40.9
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 5.3e-80 303.1 748 33.2
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 6.5e-78 296.2 747 33.6
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.5e-74 285.0 725 33.8
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 7.4e-74 282.7 741 32.3
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 2.8e-73 280.8 742 32.6
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.8e-70 270.4 729 34.4
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.9e-69 268.1 770 31.9
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.5e-69 267.7 678 33.5
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.2e-69 266.2 632 33.9
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.6e-68 263.8 763 32.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 6.1e-68 263.1 736 33.6
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.3e-65 255.4 764 31.9
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 4.5e-63 246.9 710 33.2
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.0e-62 245.7 669 32.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 5.5e-61 240.0 737 30.8
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 7.2e-61 239.6 688 32.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.7e-60 237.7 755 32.1
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.0e-59 234.2 722 32.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 4.4e-58 230.3 627 32.9
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.4e-58 229.6 659 32.3
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-57 228.8 587 33.6
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-56 224.2 780 30.9
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.2e-55 222.2 772 30.1
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.9e-54 217.6 667 31.0
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.8e-54 217.2 749 30.7
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 5.0e-54 216.9 720 30.4
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.5e-53 214.5 720 31.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.5e-53 214.5 679 32.1
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.6e-52 210.7 697 31.1
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.0e-51 209.1 770 29.6
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.7e-51 206.5 667 29.7
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 6.3e-49 199.9 727 27.4
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 3.5e-47 194.1 647 31.1
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 7.7e-47 193.0 688 30.2
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.9e-46 191.0 633 29.7
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 6.5e-46 189.9 737 30.1
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 9.4e-45 186.0 691 31.0
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.1e-40 172.6 499 32.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.1e-40 169.5 704 28.8
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 7.7e-39 166.4 700 26.9
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.0e-38 166.0 380 33.4
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 2.2e-38 164.9 601 30.8
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.8e-35 155.2 651 30.3
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.4e-34 151.0 658 28.9
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.3e-33 149.1 717 26.5
TPR.G35411 Trifolium pratense HOM05D000001 ORTHO05D000003 1.7e-33 148.7 107 71.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.7e-33 148.7 555 29.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 5.4e-32 143.7 652 28.2
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 5.4e-32 143.7 700 26.9
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.7e-31 141.4 604 27.5
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 3.8e-30 137.5 547 30.0
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 6.5e-30 136.7 678 27.9
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 8.6e-30 136.3 662 27.8
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 7.2e-29 133.3 673 27.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.0e-27 129.4 664 27.4
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.3e-27 128.3 632 27.2
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 5.2e-27 127.1 668 27.2
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.2e-27 127.1 427 29.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 3.4e-26 124.4 682 27.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 4.4e-26 124.0 589 28.5
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.4e-24 119.0 609 27.3
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.4e-24 118.2 308 32.8
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 5.4e-24 117.1 684 28.2
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 9.2e-24 116.3 265 37.7
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.2e-23 115.9 512 28.3
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 2.7e-23 114.8 682 27.6
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 2.3e-22 111.7 488 28.7
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.9e-22 111.3 660 26.5
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.9e-22 111.3 670 25.5
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.9e-21 108.6 700 25.9
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 3.3e-21 107.8 682 25.8
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.3e-21 107.8 289 34.3
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 4.3e-21 107.5 688 25.6
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 9.5e-21 106.3 603 26.7
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 6.1e-20 103.6 618 27.0
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.5e-18 99.0 686 24.8
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 9.8e-18 96.3 540 26.3
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.9e-17 94.7 643 26.3
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 3.7e-17 94.4 136 44.1
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 4.1e-16 90.9 541 25.5
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 5.4e-16 90.5 611 25.2
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-15 89.0 490 25.3
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.0e-15 88.6 278 29.5
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 7.8e-15 86.7 488 25.4
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 5.0e-14 84.0 491 24.6
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 8.6e-14 83.2 350 28.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 4.3e-13 80.9 519 24.9
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 4.3e-13 80.9 546 24.5
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 4.0e-11 74.3 130 37.7
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 1.2e-10 72.8 535 23.2
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 7.5e-10 70.1 136 41.9
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 3.7e-09 67.8 541 23.1
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 4.6e-07 60.8 258 27.9
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 1.0e-06 59.7 311 25.7
TPR.G31885 Trifolium pratense HOM05D001130 ORTHO05D013423 8.6e-06 56.6 74 41.9


User provided reference genes

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