Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 4.8e-52 207.6 109 100.0
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 1.2e-42 176.4 111 84.7
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 3.6e-39 164.9 105 81.9
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 2.0e-37 159.1 109 77.1
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 3.5e-34 148.3 108 72.2
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 1.5e-32 142.9 108 70.4
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.6e-31 139.4 107 67.3
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 1.6e-31 139.4 106 67.9
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 2.1e-31 139.0 112 67.9
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 3.6e-31 138.3 106 67.0
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 6.1e-31 137.5 104 70.2
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 1.8e-30 136.0 109 67.9
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 4.0e-30 134.8 109 64.2
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 2.6e-29 132.1 108 67.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 3.4e-29 131.7 107 63.6
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 3.4e-29 131.7 107 66.4
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 9.8e-29 130.2 98 65.3
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 9.8e-29 130.2 107 65.4
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 9.8e-29 130.2 103 65.0
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 1.3e-28 129.8 105 63.8
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 2.8e-28 128.6 107 64.5
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 2.8e-28 128.6 108 64.8
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 2.8e-28 128.6 109 65.1
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 4.8e-28 127.9 109 62.4
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 6.3e-28 127.5 109 63.3
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 1.8e-27 125.9 106 59.4
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 5.4e-27 124.4 104 64.4
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 5.4e-27 124.4 110 60.0
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 9.1e-27 123.6 109 63.3
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 1.2e-26 123.2 107 61.7
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 1.6e-26 122.9 108 63.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 1.6e-26 122.9 105 61.9
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 2.0e-26 122.5 109 59.6
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 2.7e-26 122.1 102 62.7
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 2.7e-26 122.1 102 62.7
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 2.7e-26 122.1 109 60.6
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 2.7e-26 122.1 109 58.7
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 2.7e-26 122.1 103 63.1
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 2.7e-26 122.1 88 69.3
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 2.7e-26 122.1 106 61.3
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 2.7e-26 122.1 104 62.5
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 5.9e-26 120.9 109 58.7
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 1.0e-25 120.2 107 58.9
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 1.7e-25 119.4 109 57.8
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 1.7e-25 119.4 105 64.8
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 2.9e-25 118.6 93 64.5
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 3.8e-25 118.2 103 62.1
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 3.8e-25 118.2 104 59.6
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 6.5e-25 117.5 102 59.8
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 8.6e-25 117.1 96 62.5
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 8.6e-25 117.1 96 62.5
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 8.6e-25 117.1 103 58.3
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 1.1e-24 116.7 109 56.0
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 1.1e-24 116.7 107 57.9
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 1.5e-24 116.3 90 65.6
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 4.2e-24 114.8 102 58.8
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 9.5e-24 113.6 101 63.4
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 9.5e-24 113.6 106 56.6
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 1.6e-23 112.8 101 61.4
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 1.6e-23 112.8 101 61.4
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 2.8e-23 112.1 99 60.6
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 3.6e-23 111.7 109 60.6
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 3.6e-23 111.7 110 57.3
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 6.1e-23 110.9 109 57.8
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 8.0e-23 110.5 92 64.1
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 8.0e-23 110.5 108 55.6
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 8.0e-23 110.5 102 58.8
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.0e-22 110.2 109 57.8
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 1.0e-22 110.2 86 64.0
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 1.4e-22 109.8 106 55.7
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.4e-22 109.8 101 60.4
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 1.8e-22 109.4 86 61.6
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 1.8e-22 109.4 108 57.4
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 1.8e-22 109.4 86 62.8
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 2.3e-22 109.0 86 64.0
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 3.0e-22 108.6 86 62.8
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 3.0e-22 108.6 101 60.4
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 4.0e-22 108.2 86 61.6
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 4.0e-22 108.2 86 62.8
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 1.5e-21 106.3 109 56.9
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 2.6e-21 105.5 86 62.8
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 2.6e-21 105.5 102 52.9
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 3.4e-21 105.1 88 60.2
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 9.8e-21 103.6 109 52.3
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.3e-20 103.2 86 60.5
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.3e-20 103.2 104 53.8
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 2.2e-20 102.4 81 64.2
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 2.8e-20 102.1 86 60.5
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 2.8e-20 102.1 105 55.2
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 2.4e-19 99.0 107 49.5
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 2.4e-19 99.0 86 59.3
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 1.2e-18 96.7 107 51.4
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 7.8e-18 94.0 90 54.4
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 4.3e-16 88.2 85 51.8
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 5.2e-14 81.3 84 48.8
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 6.8e-14 80.9 87 44.8
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 2.2e-12 75.9 89 43.8
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.1e-11 73.6 90 48.9
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 4.1e-11 71.6 73 53.4
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 5.4e-11 71.2 90 44.4
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 5.2e-06 54.7 53 49.1


User provided reference genes

Program Settings