Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 4.8e-42 174.1 88 100.0
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 5.8e-32 140.6 89 86.5
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 1.3e-31 139.4 90 85.6
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 3.8e-31 137.9 89 82.0
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 2.7e-29 131.7 90 82.2
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 7.9e-29 130.2 88 77.3
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 8.7e-28 126.7 87 78.2
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 2.5e-27 125.2 90 76.7
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 7.4e-27 123.6 89 75.3
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 5.3e-25 117.5 92 71.7
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 1.0e-20 103.2 87 65.5
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 4.3e-19 97.8 93 62.4
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 4.3e-19 97.8 87 64.4
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 7.4e-19 97.1 95 58.9
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 1.6e-18 95.9 91 68.1
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 2.2e-18 95.5 88 61.4
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 2.2e-18 95.5 87 63.2
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 2.8e-18 95.1 91 63.7
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 3.7e-18 94.7 86 59.3
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 6.3e-18 94.0 86 58.1
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 8.2e-18 93.6 89 62.9
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.1e-17 93.2 87 59.8
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.4e-17 92.8 90 62.2
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.8e-17 92.4 87 59.8
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.8e-17 92.4 86 58.1
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.8e-17 92.4 93 59.1
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.8e-17 92.4 70 71.4
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 5.3e-17 90.9 95 57.9
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 5.3e-17 90.9 94 58.5
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 6.9e-17 90.5 92 57.6
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.0e-17 90.1 70 71.4
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 2.6e-16 88.6 92 58.7
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.6e-16 88.6 76 64.5
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.6e-16 88.6 76 64.5
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.9e-15 85.1 74 62.2
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 2.9e-15 85.1 75 64.0
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 3.2e-14 81.6 77 61.0
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 3.2e-14 81.6 92 58.7
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 5.5e-14 80.9 77 58.4
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 9.4e-14 80.1 70 62.9
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.2e-13 79.7 75 58.7
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 1.6e-13 79.3 79 58.2
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 1.6e-13 79.3 98 55.1
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 2.7e-13 78.6 73 60.3
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.6e-13 77.8 76 56.6
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 4.6e-13 77.8 110 48.2
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 4.6e-13 77.8 77 61.0
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 4.6e-13 77.8 112 47.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 6.1e-13 77.4 102 48.0
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 1.0e-12 76.6 110 48.2
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.4e-12 76.3 104 48.1
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.4e-12 76.3 69 59.4
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.4e-12 76.3 69 59.4
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.4e-12 76.3 75 61.3
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.0e-12 75.1 110 46.4
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 3.0e-12 75.1 99 48.5
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 6.7e-12 73.9 74 60.8
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 2.5e-11 72.0 71 64.8
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.5e-11 72.0 111 42.3
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 7.4e-11 70.5 109 43.1
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 7.4e-11 70.5 102 49.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 1.3e-10 69.7 111 43.2
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 3.7e-10 68.2 111 41.4
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 1.8e-09 65.9 109 45.0
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 2.4e-09 65.5 89 48.3
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 2.4e-09 65.5 110 44.5
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 4.1e-09 64.7 74 54.1
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 5.9e-08 60.8 78 47.4
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 1.3e-07 59.7 78 44.9
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 6.5e-07 57.4 71 52.1
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 2.5e-06 55.5 74 48.6
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 2.5e-06 55.5 40 70.0


User provided reference genes

Program Settings