Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.7e-109 399.4 211 100.0
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.7e-109 399.4 211 100.0
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.3e-56 223.8 180 75.0
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 1.1e-55 220.7 184 72.8
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 4.2e-52 208.8 181 69.1
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 3.8e-45 185.7 179 63.1
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.1e-44 184.1 178 62.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 2.5e-44 183.0 178 62.9
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.2e-44 182.6 177 63.8
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.6e-43 180.3 178 60.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.0e-37 161.0 179 59.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.0e-37 161.0 178 59.6
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.2e-37 159.8 189 54.5
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 3.8e-37 159.1 189 54.5
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 7.2e-36 154.8 178 55.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 9.4e-36 154.5 172 57.0
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 2.1e-35 153.3 178 55.6
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.1e-35 153.3 182 58.2
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 6.1e-35 151.8 184 53.8
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.3e-34 149.8 177 56.5
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 3.0e-34 149.4 179 54.2
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.1e-34 148.7 182 57.1
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 5.1e-34 148.7 182 57.1
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 8.8e-34 147.9 183 53.6
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 8.8e-34 147.9 177 54.2
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.1e-33 147.5 179 53.1
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.5e-33 147.1 183 53.6
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.0e-33 146.7 176 54.0
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 7.4e-33 144.8 177 57.1
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 7.4e-33 144.8 181 54.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.7e-32 143.7 181 53.6
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.7e-32 143.7 183 53.0
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.2e-32 141.4 181 54.1
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.8e-31 140.2 181 54.1
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.8e-31 140.2 177 54.2
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 3.1e-31 139.4 182 50.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 4.1e-31 139.0 180 51.7
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 5.3e-31 138.7 171 53.8
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.0e-30 136.7 179 51.4
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.6e-30 136.3 181 53.0
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.6e-30 136.3 182 51.6
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.7e-29 133.7 178 50.0
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.2e-29 133.3 178 49.4
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.1e-28 131.0 167 51.5
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 1.4e-28 130.6 177 49.7
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 7.2e-28 128.3 180 51.1
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.6e-27 127.1 178 48.3
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.1e-27 126.7 187 43.3
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.7e-27 126.3 185 47.6
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.7e-27 126.3 176 53.4
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.7e-27 126.3 176 53.4
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.4e-26 124.0 182 47.3
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.8e-26 123.6 180 50.0
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-26 123.6 179 50.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 3.9e-26 122.5 177 48.6
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 6.7e-26 121.7 171 46.8
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.5e-25 120.6 194 44.3
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 3.3e-25 119.4 182 47.8
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 4.4e-25 119.0 178 48.3
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 9.7e-25 117.9 159 49.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 9.7e-25 117.9 167 48.5
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 9.7e-25 117.9 194 44.8
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 2.8e-24 116.3 205 42.9
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.7e-24 115.9 187 46.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.7e-24 115.9 187 46.0
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.2e-24 114.8 180 47.8
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.8e-23 113.6 179 45.8
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.8e-23 113.6 198 43.9
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 3.1e-23 112.8 187 46.5
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.1e-23 112.8 181 42.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 3.1e-23 112.8 197 42.1
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 5.3e-23 112.1 175 46.3
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 7.0e-23 111.7 167 44.3
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 9.1e-23 111.3 180 45.0
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.0e-22 110.2 183 45.9
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 7.7e-22 108.2 180 42.8
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.0e-21 107.8 218 43.1
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.2e-21 106.7 195 41.5
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.9e-21 106.3 167 48.5
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 6.5e-21 105.1 183 45.4
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 8.5e-21 104.8 177 46.3
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.5e-20 103.2 175 45.1
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 3.2e-20 102.8 177 42.9
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 3.2e-20 102.8 169 46.2
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 9.4e-20 101.3 187 40.6
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.6e-19 100.5 124 52.4
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.7e-19 99.8 140 47.1
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.7e-19 99.8 183 41.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.3e-18 96.7 138 43.5
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 2.3e-18 96.7 138 43.5
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.3e-18 96.7 170 42.4
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 5.2e-18 95.5 181 42.5
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 5.2e-18 95.5 166 45.8
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.1e-17 94.4 156 42.3
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.5e-17 94.0 124 50.8
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 2.0e-17 93.6 182 40.7
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 2.6e-17 93.2 179 42.5
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 9.7e-17 91.3 180 38.3
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-16 90.1 141 44.7
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.2e-16 90.1 141 44.7
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.2e-16 90.1 179 41.3
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.7e-16 89.4 180 37.8
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 8.2e-16 88.2 194 39.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 8.2e-16 88.2 186 40.9
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.8e-15 87.0 182 41.2
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.4e-15 86.7 161 42.9
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 3.1e-15 86.3 181 39.8
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 3.1e-15 86.3 169 42.0
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.6e-14 84.0 178 40.4
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 2.0e-14 83.6 80 61.2
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 5.9e-14 82.0 181 37.0
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 2.9e-13 79.7 177 36.2
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 6.5e-13 78.6 153 39.2
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-12 77.8 125 44.0
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 4.2e-12 75.9 153 39.2
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.5e-12 75.5 158 41.8
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 7.2e-12 75.1 179 37.4
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 9.4e-12 74.7 144 41.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.2e-11 74.3 158 39.9
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-11 74.3 158 39.9
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 2.1e-11 73.6 156 40.4
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 2.1e-11 73.6 81 56.8
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.7e-11 73.2 124 44.4
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 8.0e-11 71.6 160 40.0
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.8e-08 63.2 168 34.5
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 3.7e-08 62.8 156 35.9
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 3.7e-08 62.8 106 42.5
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-07 60.8 77 51.9
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-07 60.8 77 51.9
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 1.6e-06 57.4 186 32.8


User provided reference genes

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