Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.5e-74 282.7 139 100.0
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.1e-56 221.5 137 82.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.2e-55 219.9 138 82.6
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 7.2e-53 210.7 126 84.1
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 9.8e-50 200.3 128 80.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 1.8e-48 196.1 134 77.6
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.4e-48 195.7 131 77.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 3.9e-46 188.3 122 77.0
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 5.6e-45 184.5 119 78.2
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.0e-43 180.3 122 71.3
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.0e-43 180.3 120 70.8
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 3.1e-43 178.7 123 68.3
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.0e-43 178.3 125 68.0
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 6.8e-43 177.6 120 70.0
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 6.8e-43 177.6 123 69.1
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 6.8e-43 177.6 123 68.3
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 6.8e-43 177.6 125 67.2
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.0e-42 176.0 130 66.9
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 2.0e-42 176.0 108 78.7
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 2.0e-42 176.0 122 70.5
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 3.4e-42 175.3 124 70.2
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 4.4e-42 174.9 130 66.9
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 4.4e-42 174.9 126 68.3
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.4e-42 174.9 109 75.2
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 5.8e-42 174.5 118 69.5
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 7.5e-42 174.1 131 67.2
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 7.5e-42 174.1 126 66.7
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 9.8e-42 173.7 128 66.4
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.9e-41 171.4 122 66.4
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.9e-41 171.4 126 67.5
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 6.4e-41 171.0 122 66.4
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 8.3e-41 170.6 110 70.0
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 8.3e-41 170.6 129 69.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.1e-40 170.2 126 64.3
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.4e-40 169.9 130 66.2
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.9e-40 169.5 120 69.2
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.4e-40 169.1 127 67.7
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.4e-40 169.1 122 65.6
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.4e-40 169.1 134 61.2
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.2e-40 168.7 118 69.5
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.2e-40 168.7 120 69.2
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 4.1e-40 168.3 126 64.3
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.4e-40 167.9 125 64.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.4e-40 167.9 125 64.0
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 5.4e-40 167.9 144 59.7
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 5.4e-40 167.9 127 66.9
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 7.0e-40 167.5 110 69.1
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.0e-40 167.5 125 62.4
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 9.2e-40 167.2 120 68.3
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 9.2e-40 167.2 132 62.1
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 9.2e-40 167.2 124 66.1
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.2e-39 166.8 118 63.6
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.6e-39 166.4 122 63.9
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.6e-39 166.4 122 63.9
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.6e-39 166.4 126 61.1
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.0e-39 166.0 115 69.6
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 3.5e-39 165.2 126 64.3
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.8e-39 164.1 127 66.9
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.0e-38 163.7 125 64.0
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.7e-38 162.9 127 63.0
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.3e-38 162.5 127 63.0
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 2.3e-38 162.5 118 60.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 3.0e-38 162.2 128 64.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 3.0e-38 162.2 126 62.7
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.1e-37 160.2 127 60.6
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.5e-37 159.8 118 60.2
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.9e-37 159.5 127 59.1
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.9e-37 159.5 127 62.2
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.9e-37 159.5 108 71.3
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.9e-37 159.5 108 71.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 2.5e-37 159.1 120 65.0
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.5e-37 159.1 108 71.3
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 5.6e-37 157.9 127 60.6
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 9.5e-37 157.1 122 61.5
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 2.8e-36 155.6 127 60.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.8e-36 155.6 119 64.7
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 6.2e-36 154.5 129 61.2
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 6.2e-36 154.5 123 61.8
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 8.1e-36 154.1 127 58.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.4e-35 153.3 127 58.3
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.8e-35 152.9 127 57.5
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.8e-35 152.9 127 57.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.8e-35 152.9 127 57.5
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.8e-35 152.9 127 57.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.8e-35 152.9 127 57.5
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 2.3e-35 152.5 137 56.9
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 6.4e-33 144.4 87 82.8
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 8.3e-33 144.1 97 71.1
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.4e-32 143.3 121 59.5
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.6e-31 139.8 87 72.4
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.3e-27 125.9 107 60.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 8.9e-27 124.0 112 58.0
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.5e-26 123.2 100 64.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.4e-26 122.1 79 73.4
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.2e-25 119.4 79 73.4
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.4e-25 117.9 107 58.9
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.1e-24 117.1 79 68.4
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.9e-24 116.3 97 59.8
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 5.6e-21 104.8 123 46.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.2e-20 103.6 105 50.5
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 2.1e-20 102.8 120 46.7
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.7e-20 101.7 129 45.7
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 3.1e-19 99.0 118 41.5
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 7.8e-15 84.3 66 57.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 8.7e-14 80.9 107 42.1
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.1e-12 76.3 106 44.3
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.4e-08 63.5 44 70.5
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.0e-06 57.4 40 65.0
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 6.6e-06 54.7 44 54.5


User provided reference genes

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