Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15362_v3 Cicer arietinum L. HOM05D006158 ORTHO05D007065 1.1e-95 353.2 176 100.0
TPR.G38099 Trifolium pratense HOM05D006158 ORTHO05D007065 1.7e-86 322.8 179 89.4
Medtr3g116830 Medicago truncatula HOM05D006158 ORTHO05D007065 8.2e-86 320.5 179 89.4
Psat5g004200 Pisum sativum HOM05D006158 ORTHO05D007065 1.4e-85 319.7 179 89.9
arahy.Tifrunner.gnm1.ann1.VMSS78 Arachis hypogaea HOM05D006158 ORTHO05D007065 7.0e-85 317.4 179 88.3
arahy.Tifrunner.gnm1.ann1.VZ83MM Arachis hypogaea HOM05D006158 ORTHO05D007065 7.0e-85 317.4 179 88.3
Lj1g0002606 Lotus japonicus HOM05D006158 ORTHO05D007065 3.8e-83 311.6 179 87.2
Glyma.04G012400 Glycine max HOM05D006158 ORTHO05D007065 2.1e-81 305.8 179 86.0
VMungo1309G1281 Vigna mungo HOM05D006158 ORTHO05D007065 7.5e-79 297.4 179 82.7
Manes.11G086500 Manihot esculenta HOM05D006158 ORTHO05D007065 5.3e-77 291.2 175 82.3
Phvul.009G023400 Phaseolus vulgaris HOM05D006158 ORTHO05D007065 9.1e-77 290.4 179 79.9
Aa31LG7G14860 Aethionema arabicum HOM05D006158 ORTHO05D007065 2.7e-76 288.9 178 78.7
CSS0017185 Camellia sinensis var. sinensis HOM05D006158 ORTHO05D007065 4.5e-76 288.1 179 77.1
Nn5g29641 Nelumbo nucifera HOM05D006158 ORTHO05D007065 5.9e-76 287.7 179 76.5
THA.LOC104824819 Tarenaya hassleriana HOM05D006158 ORTHO05D007065 1.0e-75 287.0 178 78.7
Cpa.g.sc62.161 Carica papaya HOM05D006158 ORTHO05D007065 1.3e-75 286.6 171 83.6
Gohir.D12G028800 Gossypium hirsutum HOM05D006158 ORTHO05D007065 1.3e-75 286.6 179 80.4
Gorai.008G029500 Gossypium raimondii HOM05D006158 ORTHO05D007065 1.3e-75 286.6 179 80.4
Nitab4.5_0000336g0020 Nicotiana tabacum HOM05D006158 ORTHO05D007065 1.3e-75 286.6 180 79.4
CiPaw.06G134600 Carya illinoinensis HOM05D006158 ORTHO05D007065 1.7e-75 286.2 179 76.5
BcaB08g34988 Brassica carinata HOM05D006158 ORTHO05D007065 2.9e-75 285.4 178 77.5
Peaxi162Scf00684g00228 Petunia axillaris HOM05D006158 ORTHO05D007065 2.9e-75 285.4 179 79.3
CARHR112610 Cardamine hirsuta HOM05D006158 ORTHO05D007065 5.0e-75 284.6 178 76.4
MBI16_g07736_MAGBIO Magnolia biondii HOM05D006158 ORTHO05D007065 5.0e-75 284.6 179 76.0
Thecc.02G083700 Theobroma cacao HOM05D006158 ORTHO05D007065 5.0e-75 284.6 179 79.3
Lalb_Chr23g0265361 Lupinus albus HOM05D006158 ORTHO05D007065 6.5e-75 284.3 179 79.9
Cfa004987 Carpinus fangiana HOM05D006158 ORTHO05D007065 8.5e-75 283.9 181 75.7
Haze_02402 Corylus avellana HOM05D006158 ORTHO05D007065 1.1e-74 283.5 181 76.2
Sp4g00780 Schrenkiella parvula HOM05D006158 ORTHO05D007065 1.5e-74 283.1 178 76.4
CANSAT35G0650 Cannabis sativa HOM05D006158 ORTHO05D007065 2.5e-74 282.3 179 76.0
Cc02_g17430 Coffea canephora HOM05D006158 ORTHO05D007065 2.5e-74 282.3 179 76.0
Oeu020748.1 Olea europaea HOM05D006158 ORTHO05D007065 2.5e-74 282.3 179 77.1
CiPaw.05G065900 Carya illinoinensis HOM05D006158 ORTHO05D007065 3.2e-74 282.0 179 76.5
Gohir.A12G029500 Gossypium hirsutum HOM05D006158 ORTHO05D007065 3.2e-74 282.0 179 78.8
AT2G21620 Arabidopsis thaliana HOM05D006158 ORTHO05D007065 4.2e-74 281.6 178 75.8
C08p41330 Brassica napus HOM05D001159 ORTHO05D001712 4.2e-74 281.6 177 78.0
Duzib132G0028 Durio zibethinus HOM05D006158 ORTHO05D007065 5.5e-74 281.2 179 78.2
BcaC07g41131 Brassica carinata HOM05D006158 ORTHO05D007065 9.4e-74 280.4 178 77.5
Thhalv10000338m.g Eutrema salsugineum HOM05D006158 ORTHO05D007065 9.4e-74 280.4 178 76.4
Potri.004G156200 Populus trichocarpa HOM05D006158 ORTHO05D007065 9.4e-74 280.4 179 78.2
Solyc01g109710.3 Solanum lycopersicum HOM05D006158 ORTHO05D007065 1.2e-73 280.0 179 78.2
Sopen01g051900 Solanum pennellii HOM05D006158 ORTHO05D007065 1.2e-73 280.0 179 78.2
A09p58080 Brassica napus HOM05D001159 ORTHO05D001712 2.1e-73 279.3 178 78.1
Carub.0004s0065 Capsella rubella HOM05D006158 ORTHO05D007065 2.1e-73 279.3 178 75.3
CsaV3_2G014760 Cucumis sativus L. HOM05D006158 ORTHO05D007065 3.6e-73 278.5 175 77.7
Hma1.2p1_2192F.1_g316750 Hydrangea macrophylla HOM05D006158 ORTHO05D007065 3.6e-73 278.5 170 80.6
Hma1.2p1_2496F.1_g323328 Hydrangea macrophylla HOM05D006158 ORTHO05D007065 3.6e-73 278.5 170 80.6
PGR042G1835 Punica granatum HOM05D006158 ORTHO05D007065 4.7e-73 278.1 181 78.5
Aqoxy5G01600 Aquilegia oxysepala HOM05D006158 ORTHO05D007065 6.1e-73 277.7 181 77.3
MSTRG.20075 Avicennia marina HOM05D006158 ORTHO05D007065 6.1e-73 277.7 175 78.9
CAN.G1412.17 Capsicum annuum HOM05D006158 ORTHO05D007065 8.0e-73 277.3 179 77.1
ClCG11G004360 Citrullus lanatus HOM05D006158 ORTHO05D007065 1.4e-72 276.6 175 76.0
Duzib052G0490 Durio zibethinus HOM05D006158 ORTHO05D007065 1.4e-72 276.6 179 74.3
Sabra04G0104200 Salix brachista HOM05D006158 ORTHO05D007065 1.8e-72 276.2 179 75.4
TAR381G1268 Trochodendron aralioides HOM05D006158 ORTHO05D007065 1.8e-72 276.2 179 73.2
unitig_0.g63 Utricularia gibba HOM05D006158 ORTHO05D007065 2.3e-72 275.8 179 76.0
Sed0010470 Sechium edule HOM05D006158 ORTHO05D007065 3.0e-72 275.4 179 75.4
EL10Ac9g21712 Beta vulgaris HOM05D006158 ORTHO05D007065 5.2e-72 274.6 179 74.3
SGA_v2.0_scaffold32G13170 Striga asiatica HOM05D006158 ORTHO05D007065 5.2e-72 274.6 179 74.3
Oeu029148.1 Olea europaea HOM05D006158 ORTHO05D007065 6.8e-72 274.2 179 76.0
Dinv42054 Davidia involucrata HOM05D006158 ORTHO05D007065 1.2e-71 273.5 179 76.5
ECA240G2632 Erigeron canadensis HOM05D006158 ORTHO05D007065 1.5e-71 273.1 180 76.1
Migut.B00227 Erythranthe guttata HOM05D006158 ORTHO05D007065 2.0e-71 272.7 179 76.5
BraA09t41196Z Brassica rapa HOM05D001159 ORTHO05D001712 2.6e-71 272.3 185 75.1
Hund06240 Selenicereus undatus HOM05D006158 ORTHO05D007065 2.6e-71 272.3 179 73.7
Potri.009G117500 Populus trichocarpa HOM05D006158 ORTHO05D007065 4.4e-71 271.6 176 75.6
Eucgr.G01684 Eucalyptus grandis HOM05D006158 ORTHO05D007065 1.3e-70 270.0 182 73.1
HanXRQChr09g0248171 Helianthus annuus HOM05D006158 ORTHO05D007065 1.7e-70 269.6 173 76.3
MELO3C023300.2 Cucumis melo HOM05D006158 ORTHO05D007065 3.7e-70 268.5 166 79.5
Sabra09G0090100 Salix brachista HOM05D006158 ORTHO05D007065 4.8e-70 268.1 178 74.7
BolC8t51695H Brassica oleracea HOM05D001159 ORTHO05D001712 8.3e-70 267.3 185 73.0
PSO675G7009 Papaver somniferum HOM05D006158 ORTHO05D007065 1.1e-69 266.9 180 75.0
AUR62011306 Chenopodium quinoa HOM05D006158 ORTHO05D007065 1.8e-69 266.2 179 74.3
Ciclev10029371m.g Citrus clementina HOM05D006158 ORTHO05D007065 3.1e-69 265.4 178 74.2
Lj9A374T110 Lonicera japonica HOM05D006158 ORTHO05D007065 4.1e-69 265.0 179 76.0
CDE05G2374 Ceratophyllum demersum HOM05D006158 ORTHO05D007065 7.0e-69 264.2 179 69.8
Ah.01g019280 Amaranthus hybridus HOM05D006158 ORTHO05D007065 9.1e-69 263.8 174 75.9
Gohir.A04G127801 Gossypium hirsutum HOM05D006158 ORTHO05D007065 9.1e-69 263.8 177 74.6
Nitab4.5_0002241g0040 Nicotiana tabacum HOM05D006158 ORTHO05D007065 2.7e-68 262.3 176 73.9
Gohir.D04G167000 Gossypium hirsutum HOM05D006158 ORTHO05D007065 3.5e-68 261.9 177 74.0
CSS0043812 Camellia sinensis var. sinensis HOM05D006158 ORTHO05D007065 4.5e-68 261.5 162 78.4
Gorai.012G155300 Gossypium raimondii HOM05D006158 ORTHO05D007065 4.5e-68 261.5 177 74.0
Prupe.8G095600 Prunus persica HOM05D006158 ORTHO05D007065 4.5e-68 261.5 179 72.1
Potri.004G156100 Populus trichocarpa HOM05D006158 ORTHO05D007065 7.7e-68 260.8 170 77.1
CDE11G1056 Ceratophyllum demersum HOM05D006158 ORTHO05D007065 1.0e-67 260.4 179 68.7
Zm00001eb252090 Zea mays HOM05D006158 ORTHO05D007065 1.3e-67 260.0 181 69.6
COL.COLO4_25946 Corchorus olitorius HOM05D006158 ORTHO05D007065 2.9e-67 258.8 170 77.6
AL4G10820 Arabidopsis lyrata HOM05D006158 ORTHO05D007065 3.8e-67 258.5 227 59.5
vmacro02093 Vaccinium macrocarpon HOM05D006158 ORTHO05D007065 6.5e-67 257.7 234 59.0
Os02g0705400 Oryza sativa ssp. japonica HOM05D006158 ORTHO05D007065 3.2e-66 255.4 181 67.4
GSVIVG01023785001 Vitis vinifera HOM05D006158 ORTHO05D007065 2.1e-65 252.7 169 74.0
FvH4_2g09040 Fragaria vesca HOM05D006158 ORTHO05D007065 2.8e-65 252.3 179 69.3
Atru.chr5.3034 Acer truncatum HOM05D006158 ORTHO05D007065 4.7e-65 251.5 180 70.6
HPP92_008313 Vanilla planifolia HOM05D006158 ORTHO05D007065 1.0e-64 250.4 171 73.1
FAN15G1568 Fragaria x ananassa HOM05D006158 ORTHO05D007065 8.8e-64 247.3 180 68.9
FAN27G0970 Fragaria x ananassa HOM05D006158 ORTHO05D007065 2.6e-63 245.7 180 68.3
RcHm_v2.0_Chr6g0264711 Rosa chinensis HOM05D006158 ORTHO05D007065 3.4e-63 245.4 179 69.3
Nn1g04950 Nelumbo nucifera HOM05D006158 ORTHO05D007065 7.5e-63 244.2 172 69.2
DCAR_028978 Daucus carota HOM05D006158 ORTHO05D007065 6.3e-62 241.1 187 70.1
QL11p044699 Quercus lobata HOM05D006158 ORTHO05D007065 2.4e-61 239.2 178 66.3
QL11p044722 Quercus lobata HOM05D006158 ORTHO05D007065 2.4e-61 239.2 178 66.3
PGSC0003DMG400000731 Solanum tuberosum HOM05D006158 ORTHO05D007065 5.9e-60 234.6 143 83.2
HPP92_004901 Vanilla planifolia HOM05D006158 ORTHO05D007065 3.8e-59 231.9 170 68.2
Sc18g0004420 Simmondsia chinensis HOM05D006158 ORTHO05D007065 8.6e-59 230.7 143 79.7
MD10G1073900 Malus domestica HOM05D006158 ORTHO05D007065 1.5e-58 229.9 170 68.8
Rhsim11G0178600 Rhododendron simsii HOM05D006158 ORTHO05D007065 3.6e-57 225.3 138 80.4
DCAR_022980 Daucus carota HOM05D006158 ORTHO05D007065 6.8e-56 221.1 170 64.1
SalBow6G0500 Salvia bowleyana HOM05D006158 ORTHO05D007065 1.5e-55 219.9 147 76.9
SEGI_06830 Sequoiadendron giganteum HOM05D006158 ORTHO05D007065 5.7e-55 218.0 187 57.2
MD05G1064900 Malus domestica HOM05D006158 ORTHO05D007065 2.0e-52 209.5 170 66.5
AUR62016751 Chenopodium quinoa HOM05D006158 ORTHO05D007065 3.5e-52 208.8 179 61.5
DCAR_001571 Daucus carota HOM05D006158 ORTHO05D007065 1.5e-50 203.4 170 63.5
TWI79G1412 Tripterygium wilfordii HOM05D006158 ORTHO05D007065 5.6e-50 201.4 172 64.5
ECA234G4498 Erigeron canadensis HOM05D006158 ORTHO05D007065 3.6e-49 198.7 153 64.1
HanXRQChr12g0376151 Helianthus annuus HOM05D006158 ORTHO05D007065 4.0e-48 195.3 149 64.4
Lsat_1_v5_gn_5_119101 Lactuca sativa HOM05D006158 ORTHO05D007065 8.9e-48 194.1 187 55.6
Hund00258 Selenicereus undatus HOM05D006158 ORTHO05D007065 2.0e-44 183.0 135 68.1
Sabra04G0104100 Salix brachista HOM05D006158 ORTHO05D007065 4.4e-39 165.2 106 77.4
Dinv04691 Davidia involucrata HOM05D006158 ORTHO05D007065 2.2e-38 162.9 106 77.4
Pp3c13_4400 Physcomitrium patens HOM05D006158 ORTHO05D007065 1.2e-33 147.1 138 56.5
ATR0568G175 Amborella trichopoda HOM05D006158 ORTHO05D007065 9.2e-29 131.0 78 79.5
MD05G1065000 Malus domestica HOM05D006158 ORTHO05D007065 7.8e-28 127.9 87 72.4
Mapoly0117s0006 Marchantia polymorpha HOM05D006158 ORTHO05D007065 2.8e-25 119.4 157 45.2
arahy.Tifrunner.gnm1.ann1.XF6DSS Arachis hypogaea HOM05D006158 ORTHO05D007065 5.8e-23 111.7 74 77.0
arahy.Tifrunner.gnm1.ann1.HK2K9G Arachis hypogaea HOM05D006158 ORTHO05D007065 1.7e-22 110.2 74 75.7
CDE05G0028 Ceratophyllum demersum HOM05D006158 ORTHO05D007065 7.8e-20 101.3 77 62.3
Dinv01868 Davidia involucrata HOM05D006158 ORTHO05D007065 3.0e-11 72.8 47 76.6
SEGI_20690 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 8.7e-11 71.2 157 36.3
arahy.Tifrunner.gnm1.ann1.S0LUWR Arachis hypogaea HOM05D000306 ORTHO05D007065 2.5e-10 69.7 71 54.9
EL10Ac9g20870 Beta vulgaris HOM05D006158 ORTHO05D007065 6.2e-09 65.1 41 75.6
Nitab4.5_0000308g0240 Nicotiana tabacum HOM05D006158 ORTHO05D007065 1.8e-08 63.5 42 81.0
arahy.Tifrunner.gnm1.ann1.EEM62Q Arachis hypogaea HOM05D002203 ORTHO05D007065 6.9e-08 61.6 158 35.4
SEGI_38565 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 2.0e-07 60.1 168 29.8
Mapoly0031s0130 Marchantia polymorpha HOM05D001258 ORTHO05D000158 2.6e-07 59.7 162 29.0
BcaC07g40201 Brassica carinata HOM05D000483 ORTHO05D000158 4.5e-07 58.9 156 26.9
arahy.Tifrunner.gnm1.ann1.F592RX Arachis hypogaea HOM05D000306 ORTHO05D007065 5.8e-07 58.5 38 73.7
Lalb_Chr02g0153971 Lupinus albus HOM05D000483 ORTHO05D000158 7.6e-07 58.2 174 28.2
SEGI_32600 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 7.6e-07 58.2 167 29.3
Zm00001eb340280 Zea mays HOM05D000483 ORTHO05D000158 7.6e-07 58.2 154 29.2
CBR_g3955 Chara braunii HOM05D000483 ORTHO05D000158 1.3e-06 57.4 167 25.7
Medtr1g054750 Medicago truncatula HOM05D000483 ORTHO05D000158 1.3e-06 57.4 171 28.7
Pp3c2_6440 Physcomitrium patens HOM05D001664 ORTHO05D001622 1.7e-06 57.0 166 27.7
Lj5A335T27 Lonicera japonica HOM05D000483 ORTHO05D000158 2.2e-06 56.6 164 30.5
Lj5A335T29 Lonicera japonica HOM05D000483 ORTHO05D000158 2.2e-06 56.6 163 30.7
Os01g0303800 Oryza sativa ssp. japonica HOM05D000483 ORTHO05D000158 2.2e-06 56.6 149 32.2
arahy.Tifrunner.gnm1.ann1.KZ2IY9 Arachis hypogaea HOM05D006158 ORTHO05D007065 3.8e-06 55.8 38 68.4
Migut.B00973 Erythranthe guttata HOM05D000483 ORTHO05D000158 3.8e-06 55.8 161 31.1
Manes.05G002800 Manihot esculenta HOM05D000483 ORTHO05D000158 4.9e-06 55.5 160 28.1
THA.LOC104801829 Tarenaya hassleriana HOM05D001012 ORTHO05D002597 4.9e-06 55.5 157 26.8
ATR0796G142 Amborella trichopoda HOM05D000483 ORTHO05D000158 8.4e-06 54.7 146 26.0
vmacro19732 Vaccinium macrocarpon HOM05D000483 ORTHO05D000158 8.4e-06 54.7 163 29.4


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