Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.9e-118 428.7 234 100.0
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 8.4e-78 294.3 241 73.9
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 3.5e-76 288.9 238 74.4
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 2.7e-68 262.7 232 65.5
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.9e-66 256.5 238 64.3
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 3.3e-66 255.8 211 68.7
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 6.2e-65 251.5 237 62.9
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.1e-64 250.8 228 65.4
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.1e-64 249.2 193 73.1
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 5.8e-63 245.0 221 66.1
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.9e-62 241.9 229 61.6
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 5.5e-61 238.4 187 73.3
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.6e-60 236.9 196 67.9
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.1e-60 236.5 190 70.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 2.1e-60 236.5 180 72.8
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 7.9e-60 234.6 182 72.0
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 2.3e-59 233.0 181 71.8
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.0e-59 232.6 181 71.8
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.0e-59 232.6 183 71.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 5.1e-59 231.9 217 61.8
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 6.7e-59 231.5 180 72.2
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 6.7e-59 231.5 182 71.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 8.7e-59 231.1 183 71.6
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.1e-58 230.7 184 71.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.5e-58 230.3 237 59.5
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 2.5e-58 229.6 180 68.9
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 2.5e-58 229.6 181 70.7
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 3.3e-58 229.2 191 68.6
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 3.3e-58 229.2 181 70.2
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 3.3e-58 229.2 181 70.2
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.3e-58 228.8 196 67.9
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 4.3e-58 228.8 180 70.0
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 4.3e-58 228.8 191 69.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 5.7e-58 228.4 182 70.9
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 7.4e-58 228.0 198 66.7
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 7.4e-58 228.0 181 70.2
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.6e-57 226.9 180 70.0
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.1e-57 226.5 183 69.4
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.1e-57 226.5 184 70.7
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 4.8e-57 225.3 196 65.3
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 4.8e-57 225.3 180 69.4
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 6.3e-57 224.9 195 64.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.3e-57 224.9 183 71.0
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 8.2e-57 224.6 192 67.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 197 65.5
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 178 71.3
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.4e-56 223.8 178 70.8
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.8e-56 223.4 222 60.4
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 1.8e-56 223.4 182 69.8
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.8e-56 223.4 179 70.4
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.8e-56 223.4 195 67.2
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.8e-56 223.4 217 59.4
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.4e-56 223.0 192 67.2
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.1e-56 222.6 180 69.4
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 3.1e-56 222.6 180 70.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 3.1e-56 222.6 192 69.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 3.1e-56 222.6 182 67.6
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 4.1e-56 222.2 180 68.9
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 4.1e-56 222.2 180 70.0
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 6.9e-56 221.5 215 59.5
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 9.0e-56 221.1 191 67.5
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 1.2e-55 220.7 191 64.4
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.2e-55 220.7 185 67.6
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.5e-55 220.3 193 68.9
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 2.6e-55 219.5 180 68.9
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 3.4e-55 219.2 183 69.4
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 3.4e-55 219.2 205 63.4
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 3.4e-55 219.2 182 72.0
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 4.5e-55 218.8 227 57.7
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 5.9e-55 218.4 180 68.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 5.9e-55 218.4 215 59.1
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.6e-55 218.0 190 68.4
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.9e-54 216.1 206 61.7
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 1.1e-53 214.2 189 64.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.4e-53 213.8 165 70.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.4e-53 213.8 165 70.3
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 1.9e-53 213.4 180 64.4
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.5e-53 211.8 182 68.1
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.2e-52 210.7 182 68.1
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.2e-52 210.7 134 81.3
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.0e-51 207.6 201 61.7
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 1.3e-51 207.2 169 68.0
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 2.3e-51 206.5 171 67.3
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 5.1e-51 205.3 199 60.3
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.1e-50 204.1 225 58.7
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.5e-50 203.0 178 65.2
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.5e-50 203.0 123 83.7
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 3.3e-50 202.6 180 60.6
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 7.4e-50 201.4 149 78.5
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.6e-49 200.3 183 61.7
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 3.7e-49 199.1 155 69.0
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 6.3e-49 198.4 126 81.7
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 3.1e-48 196.1 183 61.7
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 9.1e-48 194.5 169 64.5
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.2e-47 194.1 181 63.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.0e-47 193.4 161 67.1
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.4e-47 192.6 177 59.3
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.7e-46 190.3 128 75.0
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.7e-46 190.3 128 75.0
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 3.2e-45 186.0 160 66.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 3.6e-44 182.6 170 58.2
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.1e-42 177.6 160 64.4
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.6e-42 176.4 170 61.8
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 4.4e-42 175.6 138 63.8
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 5.7e-42 175.3 131 64.9
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 2.4e-40 169.9 133 62.4
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 5.3e-40 168.7 291 42.3
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.2e-39 167.5 250 44.8
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 2.1e-36 156.8 135 57.0
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 9.4e-29 131.3 186 43.5
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.6e-28 129.4 118 64.4
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 2.6e-26 123.2 101 68.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 4.4e-26 122.5 118 60.2
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.1e-24 117.9 179 48.0
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.8e-24 117.1 131 48.1
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 4.5e-23 112.5 98 57.1
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 4.2e-21 105.9 109 59.6
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.7e-20 103.2 136 40.4
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.3e-19 100.1 67 74.6
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 7.7e-15 85.1 71 64.8
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.3e-11 73.6 159 37.1


User provided reference genes

Program Settings