Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 2.1e-180 635.6 318 100.0
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 2.7e-143 512.3 320 78.8
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.8e-139 499.6 323 80.5
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 8.3e-137 490.7 342 75.4
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.6e-135 486.5 324 77.5
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 1.9e-133 479.6 327 75.8
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 7.5e-130 467.6 320 76.2
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 5.4e-128 461.5 327 76.5
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 2.3e-126 456.1 334 73.4
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 8.1e-116 421.0 322 69.9
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.1e-112 410.6 337 64.4
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.9e-109 399.8 323 66.3
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.5e-109 399.4 331 64.4
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.1e-107 394.0 324 64.8
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 2.4e-107 392.9 319 64.9
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 4.0e-107 392.1 318 61.6
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.0e-106 389.8 332 62.3
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.7e-105 386.7 326 63.5
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.4e-104 383.6 299 66.6
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.4e-104 383.6 334 62.0
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.9e-104 383.3 316 63.6
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.9e-104 383.3 316 63.6
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.9e-104 383.3 320 58.1
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 1.3e-102 377.1 318 61.9
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-102 376.7 351 59.3
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.7e-102 376.7 318 62.9
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.1e-102 375.2 357 59.1
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 1.6e-100 370.2 348 56.6
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.6e-100 370.2 347 59.9
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.6e-100 370.2 343 59.2
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 2.8e-100 369.4 354 58.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 6.2e-100 368.2 323 61.6
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 3.1e-99 365.9 339 57.5
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 4.0e-99 365.5 315 61.9
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 2.0e-98 363.2 347 57.9
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 2.0e-98 363.2 316 55.1
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 5.8e-98 361.7 325 59.1
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.3e-97 360.5 321 57.6
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 2.2e-97 359.8 318 54.4
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 2.2e-97 359.8 331 58.9
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 8.4e-97 357.8 327 58.1
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.1e-96 357.5 322 61.2
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.4e-96 357.1 316 59.5
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 1.9e-96 356.7 320 60.0
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 2.4e-96 356.3 315 60.6
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 7.1e-96 354.8 315 61.3
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 4.6e-95 352.1 323 55.7
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 7.9e-95 351.3 325 56.9
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.8e-94 350.1 382 51.3
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 2.3e-94 349.7 361 54.6
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 8.7e-94 347.8 324 58.3
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.1e-93 347.4 316 56.0
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.8e-92 342.8 316 59.5
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.8e-91 340.1 317 57.4
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.5e-90 337.0 322 58.1
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.5e-90 337.0 318 53.8
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 3.4e-90 335.9 343 54.8
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.3e-89 334.0 317 54.9
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.2e-89 333.2 347 55.6
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 6.4e-89 331.6 318 56.6
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 3.2e-88 329.3 323 58.2
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 7.9e-87 324.7 263 60.1
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.1e-85 320.9 321 53.9
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 8.2e-84 314.7 316 53.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 3.1e-83 312.8 323 52.0
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.7e-81 307.0 330 47.6
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.7e-81 307.0 319 54.5
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.9e-81 306.2 332 47.6
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 6.5e-81 305.1 338 51.5
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 8.4e-81 304.7 338 51.5
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 2.5e-80 303.1 338 51.5
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 4.2e-80 302.4 316 52.8
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 4.6e-79 298.9 342 47.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.3e-78 297.4 329 49.8
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 2.3e-78 296.6 312 49.0
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 6.7e-78 295.0 347 49.6
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 6.7e-78 295.0 352 50.9
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 8.7e-78 294.7 358 44.4
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 8.7e-78 294.7 348 49.7
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 7.4e-77 291.6 345 49.3
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 7.4e-77 291.6 345 49.3
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 7.4e-77 291.6 345 49.3
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 7.4e-77 291.6 345 49.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.6e-76 290.4 345 49.3
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 2.2e-76 290.0 338 48.2
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 2.8e-76 289.7 319 53.6
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 4.8e-76 288.9 385 45.7
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 4.8e-76 288.9 379 45.4
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 8.2e-76 288.1 305 52.5
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.1e-75 287.7 334 50.0
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.8e-75 287.0 367 45.8
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 6.9e-75 285.0 351 48.1
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.2e-74 284.3 310 49.7
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 5.9e-74 282.0 313 49.8
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 9.4e-72 274.6 316 50.0
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.1e-71 273.5 312 45.8
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.7e-71 273.1 316 45.6
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 8.8e-70 268.1 312 46.5
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.1e-69 267.7 314 49.0
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.3e-68 264.2 328 49.4
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.9e-66 255.4 312 44.9
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 1.7e-65 253.8 325 46.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 2.5e-64 250.0 304 46.4
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.7e-63 246.5 305 45.9
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 4.7e-63 245.7 262 55.3
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 3.0e-62 243.0 318 44.3
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.0e-57 228.0 293 43.7
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 5.2e-54 215.7 317 41.6
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.8e-51 207.2 346 39.0
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 2.0e-50 203.8 352 39.5
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 6.5e-49 198.7 127 69.3
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.6e-47 194.1 319 37.3
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 5.2e-46 189.1 396 32.8
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 5.7e-45 185.7 202 55.4
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.4e-43 180.3 339 37.2
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 4.1e-43 179.5 130 63.8
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.5e-41 172.2 230 41.7
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 8.5e-41 171.8 152 60.5
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.7e-33 147.5 166 46.4
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 5.7e-29 132.5 303 30.0
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 7.8e-26 122.1 302 30.5
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.5e-24 117.1 112 50.0
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 5.6e-24 115.9 296 30.7
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 4.7e-23 112.8 123 43.9
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.6e-18 97.8 321 25.5
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.7e-18 97.1 120 39.2
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.3e-17 94.7 234 33.3
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 6.8e-14 82.4 63 58.7
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.7e-10 70.5 60 55.0
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 5.6e-08 62.8 93 39.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 2.3e-06 57.4 90 36.7


User provided reference genes

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