Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.7e-268 928.7 454 100.0
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.8e-226 788.5 377 100.0
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 8.6e-196 687.2 475 74.7
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 7.6e-192 674.1 467 74.9
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 1.0e-116 424.5 408 56.4
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 2.2e-114 416.8 422 53.6
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 3.3e-102 376.3 352 56.0
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 9.8e-99 364.8 418 48.8
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 1.0e-87 328.2 413 46.2
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 6.6e-87 325.5 415 46.0
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-82 311.2 413 45.5
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 1.7e-82 310.8 413 43.3
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 2.7e-80 303.5 284 54.2
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 1.0e-79 301.6 369 45.8
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 1.2e-77 294.7 400 44.0
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 1.6e-77 294.3 396 42.4
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 5.2e-76 289.3 410 41.5
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 2.0e-75 287.3 412 41.7
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 3.4e-75 286.6 397 42.8
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 3.4e-75 286.6 430 41.2
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 4.9e-74 282.7 427 41.5
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 6.0e-72 275.8 376 42.8
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-66 258.1 235 55.7
TPR.G38872 Trifolium pratense HOM05D008547 ORTHO05D010515 5.6e-62 242.7 287 50.2
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 2.1e-61 240.7 376 39.1
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 9.9e-59 231.9 394 39.3
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 5.4e-57 226.1 304 41.8
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 1.7e-50 204.5 367 39.8
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 7.9e-48 195.7 169 60.9
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 3.9e-47 193.4 216 46.8
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 1.8e-44 184.5 247 44.1
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 4.5e-43 179.9 382 32.2
Psat4g188000 Pisum sativum HOM05D008547 ORTHO05D010515 9.7e-30 135.6 153 45.8
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 1.1e-28 132.1 357 31.7
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 1.1e-28 132.1 158 44.9
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 1.5e-27 128.3 357 31.1
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 1.5e-27 128.3 404 30.2
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 3.0e-23 114.0 151 42.4
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.9e-18 97.4 399 27.6
Medtr5g013170 Medicago truncatula HOM05D008547 ORTHO05D010515 5.5e-17 93.2 107 42.1
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 6.1e-16 89.7 289 31.1
Medtr5g013160 Medicago truncatula HOM05D008547 ORTHO05D010515 6.1e-16 89.7 150 42.0
TPR.G7992 Trifolium pratense HOM05D008547 ORTHO05D010515 5.7e-14 83.2 121 42.1
TPR.G21157 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-13 82.0 78 57.7
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 6.3e-13 79.7 398 26.4
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 6.3e-13 79.7 302 26.5
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 8.2e-13 79.3 398 26.1
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-10 72.0 89 43.8
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 1.4e-07 62.0 194 29.9
Dinv12853 Davidia involucrata HOM05D006664 ORTHO05D009007 2.3e-07 61.2 257 27.6
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 5.2e-07 60.1 44 75.0
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 1.2e-06 58.9 60 58.3
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 2.6e-06 57.8 60 55.0
SGA_v2.0_scaffold227G43210 Striga asiatica HOM05D006664 ORTHO05D009007 3.4e-06 57.4 170 28.2
TPR.G20414 Trifolium pratense HOM05D008547 ORTHO05D010515 4.4e-06 57.0 143 30.1
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 7.5e-06 56.2 60 53.3
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 7.5e-06 56.2 60 55.0


User provided reference genes

Program Settings