Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.8e-70 269.2 142 100.0
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.2e-55 219.9 140 87.9
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 7.4e-53 210.7 144 81.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 6.7e-46 187.6 133 72.2
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 5.7e-45 184.5 142 71.8
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.3e-44 183.3 145 71.7
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.3e-44 183.3 145 71.7
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 2.8e-44 182.2 143 72.7
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.8e-44 182.2 142 70.4
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 3.7e-44 181.8 133 70.7
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.1e-43 180.3 142 72.5
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.8e-43 179.5 137 70.1
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.4e-43 179.1 137 70.1
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 3.1e-43 178.7 139 65.5
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.1e-43 178.3 137 69.3
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 5.3e-43 177.9 107 85.0
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 9.1e-43 177.2 140 68.6
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 9.1e-43 177.2 104 85.6
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.5e-42 176.4 141 70.2
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 2.6e-42 175.6 141 68.8
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 5.9e-42 174.5 124 71.0
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 7.7e-42 174.1 146 66.4
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 1.0e-41 173.7 102 85.3
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 2.2e-41 172.6 139 65.5
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 2.9e-41 172.2 143 71.3
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.8e-41 171.8 102 83.3
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.8e-41 171.8 141 66.7
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 6.5e-41 171.0 104 81.7
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 8.5e-41 170.6 102 80.4
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 8.5e-41 170.6 141 66.7
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.1e-40 170.2 112 78.6
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 3.2e-40 168.7 137 66.4
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 4.2e-40 168.3 143 66.4
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 5.5e-40 167.9 101 81.2
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 9.4e-40 167.2 144 65.3
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.2e-39 166.8 104 80.8
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 1.2e-39 166.8 108 76.9
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 1.6e-39 166.4 143 69.2
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 2.1e-39 166.0 137 65.7
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 3.6e-39 165.2 111 74.8
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 4.7e-39 164.9 140 66.4
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 7.9e-39 164.1 142 63.4
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.0e-38 163.7 144 61.8
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.0e-38 163.7 95 80.0
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.8e-38 162.9 121 71.1
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 3.9e-38 161.8 147 64.6
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 3.9e-38 161.8 140 62.1
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 3.9e-38 161.8 111 73.9
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 5.2e-38 161.4 100 80.0
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.0e-37 159.5 104 76.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 2.0e-37 159.5 139 62.6
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 2.6e-37 159.1 137 65.0
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 2.6e-37 159.1 101 77.2
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 1.7e-36 156.4 99 76.8
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 1.7e-36 156.4 99 76.8
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.7e-36 156.4 101 77.2
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.7e-36 156.4 95 80.0
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.2e-36 156.0 105 74.3
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 2.8e-36 155.6 93 80.6
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 2.8e-36 155.6 107 72.0
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 3.7e-36 155.2 99 76.8
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.4e-35 153.3 147 61.2
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 1.8e-35 152.9 99 75.8
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 1.8e-35 152.9 99 75.8
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.4e-35 152.5 132 63.6
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 3.1e-35 152.1 147 60.5
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 1.2e-34 150.2 100 76.0
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 1.3e-33 146.7 104 71.2
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 2.9e-33 145.6 111 65.8
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 3.8e-33 145.2 141 58.9
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.9e-32 142.9 142 53.5
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 3.2e-32 142.1 138 58.7
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 4.2e-32 141.7 142 59.2
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 5.5e-32 141.4 113 67.3
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 5.5e-32 141.4 147 53.7
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 9.4e-32 140.6 99 69.7
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 6.1e-31 137.9 150 55.3
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.3e-30 136.0 92 66.3
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 4.0e-30 135.2 109 61.5
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 6.7e-30 134.4 112 65.2
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 8.8e-30 134.0 82 80.5
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 3.3e-29 132.1 116 64.7
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 5.7e-29 131.3 109 67.0
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 7.5e-29 131.0 79 82.3
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 2.8e-28 129.0 76 81.6
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 3.7e-28 128.6 117 64.1
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 1.8e-27 126.3 120 59.2
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 7.0e-27 124.4 79 77.2
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 7.0e-27 124.4 122 56.6
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 9.1e-27 124.0 119 57.1
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 9.1e-27 124.0 86 66.3
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.7e-26 122.5 77 74.0
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 3.5e-26 122.1 92 59.8
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 5.9e-26 121.3 107 54.2
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.7e-26 120.9 115 60.9
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.3e-25 120.2 117 59.8
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 8.5e-25 117.5 118 57.6
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 7.2e-24 114.4 70 77.1
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.1e-23 112.8 93 57.0
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.4e-22 110.2 66 74.2
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.0e-21 106.3 88 58.0
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 1.4e-14 83.6 95 55.8
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.2e-13 80.5 52 73.1
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 2.8e-12 75.9 107 40.2
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.1e-11 73.9 46 73.9
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 6.1e-07 58.2 109 38.5
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 8.9e-06 54.3 32 78.1


User provided reference genes

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