Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 2.6e-101 372.1 192 100.0
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 9.6e-88 327.0 192 88.5
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 3.4e-85 318.5 193 86.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 2.6e-77 292.4 192 79.7
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 7.6e-77 290.8 193 79.8
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 9.9e-77 290.4 192 77.1
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 9.3e-75 283.9 194 77.8
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.8e-73 279.6 187 75.9
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 2.3e-73 279.3 187 75.9
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 3.9e-73 278.5 192 74.0
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 3.4e-69 265.4 192 69.8
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 4.5e-69 265.0 191 70.2
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 1.0e-68 263.8 189 72.0
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.4e-67 260.0 192 67.7
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 3.5e-66 255.4 192 69.3
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 5.7e-64 248.1 193 66.8
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 9.7e-64 247.3 192 65.6
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 3.1e-62 242.3 192 66.1
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 5.3e-62 241.5 189 66.7
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 2.0e-61 239.6 188 64.9
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 3.4e-61 238.8 189 66.7
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.3e-60 236.9 192 63.0
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 2.2e-60 236.1 181 67.4
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 8.5e-60 234.2 182 65.4
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 1.1e-59 233.8 183 65.0
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.9e-59 233.0 194 62.9
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.9e-59 233.0 192 62.5
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 9.4e-59 230.7 192 60.9
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 2.7e-58 229.2 188 63.8
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 2.7e-58 229.2 194 61.9
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 3.6e-58 228.8 182 64.8
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 3.6e-58 228.8 194 60.8
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 3.6e-58 228.8 188 63.3
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 4.6e-58 228.4 194 61.9
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 4.6e-58 228.4 191 61.3
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 6.1e-58 228.0 192 59.9
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 6.1e-58 228.0 187 64.2
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.0e-57 227.3 191 62.3
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.4e-57 226.9 192 59.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.3e-57 226.1 168 64.9
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 3.0e-57 225.7 188 61.2
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 6.7e-57 224.6 190 62.1
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.9e-56 223.0 168 63.7
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.9e-56 223.0 159 69.8
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 1.9e-56 223.0 193 61.1
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 2.5e-56 222.6 192 59.4
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.3e-56 222.2 185 63.2
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 3.3e-56 222.2 192 61.5
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 4.3e-56 221.9 196 61.7
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 5.7e-56 221.5 192 57.8
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 7.4e-56 221.1 204 59.3
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 7.4e-56 221.1 192 59.4
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 4.8e-55 218.4 193 59.6
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 8.2e-55 217.6 190 56.3
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.1e-54 217.2 191 56.5
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.1e-54 217.2 195 55.4
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 1.1e-54 217.2 190 60.0
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.1e-54 217.2 192 58.3
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.8e-54 216.5 191 57.6
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 2.4e-54 216.1 156 68.6
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 2.4e-54 216.1 221 54.3
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 3.1e-54 215.7 187 59.9
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 6.9e-54 214.5 184 59.2
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 9.1e-54 214.2 160 67.5
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 1.2e-53 213.8 191 57.6
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 4.5e-53 211.8 171 61.4
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 7.7e-53 211.1 193 56.0
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 7.7e-53 211.1 159 67.9
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.7e-52 209.9 154 69.5
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 2.2e-52 209.5 159 67.3
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 6.5e-52 208.0 184 58.7
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-51 207.2 191 56.0
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.2e-50 203.8 153 66.0
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 2.1e-50 203.0 168 58.9
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 2.1e-50 203.0 182 62.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.7e-50 202.6 155 62.6
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.7e-50 202.6 161 62.7
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.0e-49 200.7 188 54.3
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 5.1e-49 198.4 192 54.2
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 8.8e-49 197.6 177 55.9
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 7.4e-48 194.5 200 52.0
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 7.4e-48 194.5 163 58.9
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 5.3e-46 188.3 185 53.5
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 7.0e-46 188.0 147 65.3
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 2.0e-45 186.4 181 54.1
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 2.0e-45 186.4 181 54.1
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 7.7e-45 184.5 139 65.5
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 2.5e-43 179.5 126 70.6
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 2.1e-42 176.4 102 86.3
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 3.6e-42 175.6 147 61.9
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.8e-41 173.3 143 62.9
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.3e-41 172.9 136 67.6
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 3.9e-41 172.2 194 51.0
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 5.2e-41 171.8 133 66.9
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 6.7e-41 171.4 165 55.2
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 8.8e-41 171.0 146 62.3
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 2.6e-40 169.5 111 74.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 2.4e-38 162.9 120 65.8
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 4.5e-37 158.7 159 52.2
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 1.0e-36 157.5 125 64.8
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.3e-36 157.1 122 66.4
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.7e-36 156.8 184 46.7
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 8.5e-36 154.5 125 62.4
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 1.2e-34 150.6 194 46.4
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 2.0e-32 143.3 124 56.5
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 2.0e-32 143.3 174 46.6
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 6.3e-31 138.3 107 65.4
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.2e-29 134.0 124 56.5
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.1e-26 123.2 153 44.4
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 3.4e-24 115.9 166 39.2
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.1e-22 110.9 131 49.6
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.8e-22 110.2 143 44.1
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 7.7e-21 104.8 61 80.3
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.2e-16 90.9 88 50.0
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 4.5e-13 79.0 182 30.2
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 3.4e-08 62.8 46 58.7
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 1.9e-06 57.0 50 52.0


User provided reference genes

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