Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 0.0e+00 1088.6 544 100.0
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 2.4e-224 782.3 561 74.7
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 5.6e-218 761.1 559 72.8
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 1.0e-198 697.2 471 77.3
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 1.2e-167 594.0 552 62.7
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 9.8e-162 574.3 561 61.9
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 1.2e-154 550.8 560 58.9
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 3.3e-149 532.7 552 57.8
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 1.6e-140 503.8 543 57.6
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 4.7e-140 502.3 569 55.7
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 9.2e-136 488.0 570 54.7
Glyma.11G198000 Glycine max HOM05D007641 ORTHO05D007630 2.4e-43 181.0 159 64.8
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 2.8e-31 141.0 530 30.6
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 6.2e-31 139.8 588 30.8
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.1e-27 129.0 599 29.4
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 9.5e-24 115.9 535 30.3
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 3.6e-23 114.0 538 30.3
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 8.3e-20 102.8 397 30.5
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 1.4e-19 102.1 549 28.2
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 2.4e-19 101.3 493 29.0
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 4.1e-19 100.5 529 29.1
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 4.6e-18 97.1 572 28.3
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.0e-17 94.4 494 27.9
TPR.G13888 Trifolium pratense HOM05D007641 ORTHO05D007630 3.0e-17 94.4 64 78.1
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 5.6e-16 90.1 491 26.7
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 4.7e-15 87.0 557 27.3
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 1.1e-14 85.9 554 27.4
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 9.9e-13 79.3 541 26.4
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 4.9e-12 77.0 80 56.2
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 1.1e-11 75.9 396 30.3
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 2.7e-10 71.2 515 26.0
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 1.0e-09 69.3 475 26.1
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 3.9e-09 67.4 562 24.7
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 5.1e-09 67.0 357 30.3
FAN21G1070 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.3e-08 64.3 318 28.6
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 7.3e-08 63.2 349 28.7
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 9.6e-08 62.8 358 28.8
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 8.1e-07 59.7 502 25.9
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.4e-06 58.9 347 29.4
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.8e-06 58.5 398 26.6
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 6.8e-06 56.6 355 27.6


User provided reference genes

Program Settings