Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15056_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 1.5e-149 532.7 258 100.0
Medtr3g467150 Medicago truncatula HOM05D008084 ORTHO05D010227 2.4e-102 375.9 274 71.9
Lj6g0015607 Lotus japonicus HOM05D008084 ORTHO05D010227 1.4e-97 360.1 288 65.3
TPR.G28793 Trifolium pratense HOM05D008084 ORTHO05D010227 3.7e-95 352.1 257 71.6
Psat5g148440 Pisum sativum HOM05D008084 ORTHO05D010227 1.4e-94 350.1 233 74.7
Phvul.006G078700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 9.9e-88 327.4 304 58.6
VMungo0540G0456 Vigna mungo HOM05D008084 ORTHO05D010227 2.7e-85 319.3 298 59.7
Glyma.18G052300 Glycine max HOM05D008084 ORTHO05D010227 1.1e-81 307.4 312 57.7
arahy.Tifrunner.gnm1.ann1.QQ3HDC Arachis hypogaea HOM05D008084 ORTHO05D010227 1.7e-76 290.0 309 54.0
arahy.Tifrunner.gnm1.ann1.VW3DCY Arachis hypogaea HOM05D008084 ORTHO05D010227 3.6e-74 282.3 321 51.4
Phvul.008G247700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 9.0e-73 277.7 291 53.6
Glyma.14G204200 Glycine max HOM05D008084 ORTHO05D010227 2.6e-72 276.2 292 55.1
Glyma.02G236300 Glycine max HOM05D008084 ORTHO05D010227 1.1e-70 270.8 285 54.4
VMungo0647G2268 Vigna mungo HOM05D008084 ORTHO05D010227 7.1e-70 268.1 290 53.1
Ca_05708_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 2.3e-68 263.1 318 52.2
Medtr5g075400 Medicago truncatula HOM05D008084 ORTHO05D010227 1.8e-65 253.4 310 49.7
Psat2g050960 Pisum sativum HOM05D008084 ORTHO05D010227 3.4e-64 249.2 305 50.8
LjContig00141g0012818 Lotus japonicus HOM05D008084 ORTHO05D010227 7.9e-61 238.0 287 49.8
Manes.02G211900 Manihot esculenta HOM05D008084 ORTHO05D010227 1.1e-59 234.2 324 44.1
TPR.G18293 Trifolium pratense HOM05D008084 ORTHO05D010227 7.4e-59 231.5 326 47.5
Oeu015570.1 Olea europaea HOM05D008084 ORTHO05D010227 1.4e-57 227.3 322 45.0
Potri.019G130200 Populus trichocarpa HOM05D008084 ORTHO05D010227 2.0e-56 223.4 328 44.2
TWI31G0108 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 5.8e-56 221.9 280 46.4
TAR636G1366 Trochodendron aralioides HOM05D008084 ORTHO05D010227 2.9e-55 219.5 303 45.2
Thecc.09G363800 Theobroma cacao HOM05D008084 ORTHO05D010227 2.5e-54 216.5 322 43.5
Potri.013G157100 Populus trichocarpa HOM05D008084 ORTHO05D010227 1.2e-53 214.2 336 40.5
TWI75G0204 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 1.0e-52 211.1 284 45.4
Gorai.003G152600 Gossypium raimondii HOM05D008084 ORTHO05D010227 1.3e-52 210.7 307 45.0
Gohir.D03G145500 Gossypium hirsutum HOM05D008084 ORTHO05D010227 5.1e-52 208.8 307 44.3
TWI79G0851 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 5.1e-52 208.8 262 46.2
Dinv12280 Davidia involucrata HOM05D008084 ORTHO05D010227 6.7e-52 208.4 292 44.5
FAN16G3304 Fragaria x ananassa HOM05D008084 ORTHO05D010227 6.7e-52 208.4 352 39.8
FvH4_3g40511 Fragaria vesca HOM05D008084 ORTHO05D010227 1.9e-51 206.8 347 39.2
FAN11G0725 Fragaria x ananassa HOM05D008084 ORTHO05D010227 1.9e-51 206.8 347 39.2
Gohir.A03G023200 Gossypium hirsutum HOM05D008084 ORTHO05D010227 1.9e-51 206.8 307 44.6
SalBow2G0186 Salvia bowleyana HOM05D008084 ORTHO05D010227 5.7e-51 205.3 287 47.0
CANSAT54G2569 Cannabis sativa HOM05D008084 ORTHO05D010227 1.3e-50 204.1 341 39.9
Cc01_g15320 Coffea canephora HOM05D008084 ORTHO05D010227 4.8e-50 202.2 359 41.5
Aqoxy4G02419 Aquilegia oxysepala HOM05D008084 ORTHO05D010227 2.4e-49 199.9 300 42.7
MELO3C020485.2 Cucumis melo HOM05D008084 ORTHO05D010227 4.1e-49 199.1 317 40.7
FAN25G2941 Fragaria x ananassa HOM05D008084 ORTHO05D010227 4.1e-49 199.1 343 39.1
Prupe.6G041100 Prunus persica HOM05D008084 ORTHO05D010227 4.1e-49 199.1 361 39.3
Sed0017021 Sechium edule HOM05D008084 ORTHO05D010227 2.0e-48 196.8 302 39.7
TAR623G0794 Trochodendron aralioides HOM05D008084 ORTHO05D010227 2.0e-48 196.8 295 41.4
CsaV3_1G004770 Cucumis sativus L. HOM05D008084 ORTHO05D010227 3.4e-48 196.1 317 40.4
PSO339G0360 Papaver somniferum HOM05D008084 ORTHO05D010227 4.5e-48 195.7 332 38.9
HanXRQChr16g0522641 Helianthus annuus HOM05D008084 ORTHO05D010227 1.7e-47 193.7 361 36.8
GSVIVG01024560001 Vitis vinifera HOM05D008084 ORTHO05D010227 2.2e-47 193.4 177 55.4
Eucgr.B04026 Eucalyptus grandis HOM05D008084 ORTHO05D010227 6.5e-47 191.8 179 55.3
PSO384G0724 Papaver somniferum HOM05D008084 ORTHO05D010227 6.5e-47 191.8 332 38.0
MD11G1053800 Malus domestica HOM05D008084 ORTHO05D010227 3.2e-46 189.5 385 37.7
MD03G1051700 Malus domestica HOM05D008084 ORTHO05D010227 4.2e-46 189.1 362 38.1
CiPaw.13G063700 Carya illinoinensis HOM05D008084 ORTHO05D010227 2.7e-45 186.4 334 38.9
PGR102G0866 Punica granatum HOM05D008084 ORTHO05D010227 1.0e-44 184.5 239 45.2
ECA247G2653 Erigeron canadensis HOM05D008084 ORTHO05D010227 8.7e-44 181.4 360 36.7
Migut.D00819 Erythranthe guttata HOM05D008084 ORTHO05D010227 1.5e-43 180.6 346 37.0
Lsat_1_v5_gn_9_13820 Lactuca sativa HOM05D008084 ORTHO05D010227 3.3e-43 179.5 207 47.8
MBI03_g15595_MAGBIO Magnolia biondii HOM05D008084 ORTHO05D010227 3.0e-36 156.4 286 38.5
HPP92_028207 Vanilla planifolia HOM05D008084 ORTHO05D010227 3.9e-36 156.0 246 40.2
Cpa.g.sc2.297 Carica papaya HOM05D008084 ORTHO05D010227 1.2e-32 144.4 204 43.6
RcHm_v2.0_Chr5g0073191 Rosa chinensis HOM05D008084 ORTHO05D010227 7.7e-32 141.7 253 37.2
Zm00001eb419060 Zea mays HOM05D008084 ORTHO05D010227 7.2e-30 135.2 99 63.6
HPP92_025125 Vanilla planifolia HOM05D008084 ORTHO05D010227 1.4e-28 131.0 202 39.1
Rhsim13G0059500 Rhododendron simsii HOM05D008084 ORTHO05D010227 4.1e-25 119.4 92 64.1
SEGI_31879 Sequoiadendron giganteum HOM05D008084 ORTHO05D010227 2.0e-24 117.1 138 45.7
Cfa011830 Carpinus fangiana HOM05D008084 ORTHO05D010227 5.5e-22 109.0 270 34.4
Actinidia11623 Actinidia chinensis HOM05D008084 ORTHO05D010227 4.2e-14 82.8 185 34.6
Mapoly0102s0044 Marchantia polymorpha HOM05D008084 ORTHO05D010227 7.5e-11 72.0 68 44.1
ATR1127G215 Amborella trichopoda HOM05D008084 ORTHO05D010227 7.7e-08 62.0 191 34.6
AUR62003243 Chenopodium quinoa HOM05D000833 ORTHO05D000969 2.5e-06 57.0 129 29.5
Actinidia23166 Actinidia chinensis HOM05D008084 ORTHO05D010227 5.5e-06 55.8 168 33.9
Thhalv10006775m.g Eutrema salsugineum HOM05D000833 ORTHO05D000969 5.5e-06 55.8 97 27.8
TWI75G1195 Tripterygium wilfordii HOM05D000833 ORTHO05D000969 5.5e-06 55.8 69 39.1
HPP92_014046 Vanilla planifolia HOM05D000833 ORTHO05D000969 5.5e-06 55.8 116 31.9


User provided reference genes

Program Settings