Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14981_v3 Cicer arietinum L. HOM05D016525 ORTHO05D010376 6.1e-138 494.2 257 100.0
Medtr3g465380 Medicago truncatula HOM05D016525 ORTHO05D010376 5.7e-35 152.1 211 46.0
Ca_14980_v3 Cicer arietinum L. HOM05D016525 ORTHO05D010376 3.1e-33 146.4 248 42.7
TPR.G8571 Trifolium pratense HOM05D016525 ORTHO05D010376 1.8e-28 130.6 154 51.3
TPR.G32904 Trifolium pratense HOM05D016525 ORTHO05D010376 1.1e-27 127.9 185 44.9
TPR.G8557 Trifolium pratense HOM05D016525 ORTHO05D010376 3.4e-24 116.3 184 42.4
Medtr3g465350 Medicago truncatula HOM05D016525 ORTHO05D010376 5.3e-17 92.4 247 31.6
Lj3g0010389 Lotus japonicus HOM05D025460 ORTHO05D010376 1.5e-16 90.9 178 36.5
Haze_24379 Corylus avellana HOM05D028161 ORTHO05D010376 2.2e-10 70.5 118 36.4
Cfa011740 Carpinus fangiana HOM05D028161 ORTHO05D010376 2.8e-10 70.1 117 36.8
MELO3C020524.2 Cucumis melo HOM05D039867 ORTHO05D010376 8.2e-10 68.6 124 31.5
arahy.Tifrunner.gnm1.ann1.EA8GWL Arachis hypogaea HOM05D020455 ORTHO05D010376 9.1e-09 65.1 166 34.3
arahy.Tifrunner.gnm1.ann1.NC1Z37 Arachis hypogaea HOM05D000516 ORTHO05D010376 2.0e-08 63.9 146 34.2
Sed0000970 Sechium edule HOM05D011591 ORTHO05D010376 7.7e-08 62.0 145 31.0
Thecc.09G353600 Theobroma cacao HOM05D020455 ORTHO05D010376 1.7e-07 60.8 154 30.5
Manes.18G136300 Manihot esculenta HOM05D011591 ORTHO05D010376 3.8e-07 59.7 118 32.2
Sabra09G0056900 Salix brachista HOM05D011591 ORTHO05D010376 8.5e-07 58.5 105 31.4
Potri.009G075000 Populus trichocarpa HOM05D020455 ORTHO05D010376 3.2e-06 56.6 105 31.4
PGSC0003DMG400030371 Solanum tuberosum HOM05D010709 ORTHO05D010376 3.2e-06 56.6 96 38.5
THA.LOC104810699 Tarenaya hassleriana HOM05D011591 ORTHO05D010376 4.2e-06 56.2 120 32.5
Pp3c2_26970 Physcomitrium patens HOM05D002172 ORTHO05D002167 9.4e-06 55.1 110 31.8


User provided reference genes

Program Settings