Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.1e-92 341.3 161 100.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 6.8e-87 323.9 161 92.5
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 8.3e-85 317.0 161 90.1
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.1e-84 316.6 160 90.0
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 5.4e-84 314.3 161 90.1
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 3.3e-81 305.1 161 87.6
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 7.3e-81 303.9 161 86.3
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 3.1e-79 298.5 161 85.1
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.5e-78 296.2 160 85.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.8e-78 294.3 161 84.5
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.8e-78 294.3 161 84.5
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.8e-78 294.3 161 84.5
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.9e-77 292.0 160 83.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.9e-77 292.0 161 82.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.9e-77 292.0 160 82.5
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.1e-76 290.0 161 83.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 82.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 82.6
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 79.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.2e-76 288.5 158 82.9
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 9.2e-76 287.0 158 81.0
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 161 78.9
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 81.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.1e-75 285.8 157 82.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 158 82.9
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 78.9
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 79.5
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 6.0e-75 284.3 152 85.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 158 79.7
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 77.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 82.3
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.3e-74 282.3 155 82.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 79.5
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 78.3
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 3.9e-74 281.6 162 81.5
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 6.6e-74 280.8 160 79.4
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 77.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 77.0
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.9e-73 279.3 157 80.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 76.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 80.7
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-73 278.9 151 84.8
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.5e-73 278.9 157 79.6
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.3e-73 278.5 154 80.5
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 3.3e-73 278.5 161 77.6
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 5.6e-73 277.7 162 79.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 79.5
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 76.4
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 7.3e-73 277.3 160 80.0
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 160 80.0
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 160 80.0
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 79.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 79.9
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 9.5e-73 276.9 161 75.8
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 75.8
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 77.0
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 162 79.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 75.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 77.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 159 79.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 75.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 75.8
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 75.8
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 154 81.8
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 77.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 77.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 74.5
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.4e-71 272.3 154 78.6
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 5.2e-71 271.2 154 78.6
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 75.8
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.0e-70 269.2 155 80.0
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.4e-70 268.5 169 71.6
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.4e-70 268.1 161 74.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.8e-70 267.7 158 77.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.9e-70 266.9 161 72.7
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 76.4
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-69 266.2 166 71.7
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.2e-69 265.8 161 72.0
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.8e-69 265.0 161 74.5
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 72.0
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 3.2e-68 261.9 157 76.4
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 5.4e-68 261.2 160 75.0
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 5.4e-68 261.2 162 73.5
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.6e-67 259.6 148 82.4
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.7e-67 258.8 161 71.4
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 3.5e-67 258.5 152 75.7
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.8e-67 257.3 157 72.0
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.3e-66 256.5 161 75.2
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.9e-66 255.0 161 70.2
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 6.6e-66 254.2 214 57.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.6e-66 253.8 161 74.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.9e-65 252.7 158 71.5
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 3.3e-65 251.9 162 70.4
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 3.6e-64 248.4 137 81.0
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 6.2e-64 247.7 156 71.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 6.2e-64 247.7 152 71.7
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 6.9e-63 244.2 135 80.0
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.4e-62 241.9 155 67.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.8e-61 238.4 138 79.0
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.2e-59 233.4 121 86.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.6e-59 233.0 135 75.6
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.0e-59 231.1 138 76.8
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.3e-58 229.2 138 73.2
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 7.3e-57 224.2 152 71.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.5e-54 216.5 117 82.9
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 9.9e-54 213.8 188 58.0
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 4.2e-52 208.4 112 83.0
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.1e-52 207.6 140 67.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 7.9e-51 204.1 121 78.5
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.9e-50 201.8 157 65.0
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.1e-50 201.4 116 78.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 5.1e-50 201.4 142 59.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.9e-49 199.5 143 59.4
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.7e-48 195.3 142 57.7
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 4.8e-48 194.9 158 60.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 6.9e-47 191.0 112 75.9
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.5e-46 189.9 132 65.9
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 2.4e-44 182.6 93 88.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.2e-44 181.8 105 76.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 2.0e-38 162.9 100 70.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 8.4e-37 157.5 171 48.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-36 157.1 135 60.7
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.4e-36 156.8 85 83.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.1e-35 152.9 157 53.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.5e-33 146.7 86 77.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.2e-27 127.1 67 88.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.6e-19 100.1 52 82.7
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.5e-14 83.6 60 65.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 9.1e-07 57.8 70 42.9


User provided reference genes

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