Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14960_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 9.2e-209 729.9 360 100.0
Ca_03536_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.8e-107 391.3 680 38.2
Ca_13848_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.8e-94 348.6 267 69.3
Ca_04945_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-93 347.4 366 53.6
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 7.1e-92 341.7 731 35.2
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.6e-75 287.3 554 39.0
Ca_04496_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.5e-75 286.2 147 93.9
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.6e-72 276.2 148 89.9
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.0e-71 272.7 148 88.5
Ca_13847_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-70 271.2 257 55.6
Ca_19351_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.4e-70 269.2 143 92.3
Ca_07368_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-68 264.2 655 32.2
Ca_13990_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.2e-68 263.1 358 45.5
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.7e-67 260.0 164 77.4
Ca_14479_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.5e-67 259.6 148 85.1
Ca_04804_v3 Cicer arietinum L. HOM05D000047 ORTHO05D015604 9.6e-65 251.5 252 53.2
Ca_19272_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 9.0e-63 245.0 132 91.7
Ca_04497_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.4e-62 243.0 122 95.1
Ca_12998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.8e-62 242.3 122 94.3
Ca_19747_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.4e-60 236.9 156 73.1
Ca_12330_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.6e-59 234.2 148 73.6
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.3e-57 226.1 148 72.3
Ca_20102_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.6e-57 225.7 122 88.5
Ca_12132_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-56 224.6 117 94.9
Ca_22844_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.8e-56 223.4 122 86.9
Ca_05821_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.4e-55 220.3 122 85.2
Ca_11770_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.2e-53 213.8 122 85.2
Ca_06732_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.5e-52 209.1 136 72.8
Ca_11737_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 5.5e-52 209.1 122 78.7
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.7e-51 206.8 219 51.6
Ca_06964_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000589 6.0e-51 205.7 147 66.7
Ca_14527_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 6.0e-51 205.7 122 77.0
Ca_05332_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.8e-50 204.1 147 72.1
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.5e-49 200.3 687 28.8
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.3e-49 199.5 148 68.2
Ca_24309_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.6e-48 197.6 122 77.0
Ca_19966_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.2e-46 191.4 361 37.7
Ca_30319_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.2e-46 191.4 129 72.1
Ca_07036_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 7.6e-46 188.7 115 74.8
Ca_23089_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-45 188.0 133 69.9
Ca_07208_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 6.7e-42 175.6 110 71.8
Ca_26135_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 6.7e-42 175.6 90 94.4
Ca_19521_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.8e-34 151.0 117 67.5
Ca_07643_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 9.7e-33 145.2 216 43.5
Ca_02666_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.6e-30 137.1 160 51.9
Ca_02358_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.2e-27 128.3 122 56.6
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.9e-26 123.2 148 50.0
Ca_13752_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.1e-25 121.7 78 76.9
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-22 111.7 74 71.6
Ca_20599_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 7.7e-22 109.0 160 43.8
Ca_04844_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000002 1.1e-20 105.1 359 28.4
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 3.0e-18 97.1 190 30.5
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 3.0e-18 97.1 190 30.5
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 8.8e-18 95.5 190 31.1
Ca_27714_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.5e-17 94.7 78 64.1
Thecc.05G072600 Theobroma cacao HOM05D002881 ORTHO05D002983 7.0e-15 85.9 283 24.4
Thecc.09G167400 Theobroma cacao HOM05D000047 ORTHO05D000589 2.0e-14 84.3 197 27.9
Thecc.10G163100 Theobroma cacao HOM05D000047 ORTHO05D000589 2.7e-14 84.0 197 27.9
Thecc.02G251700 Theobroma cacao HOM05D000047 ORTHO05D000589 6.5e-13 79.3 197 26.4
Ca_07046_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.1e-12 78.6 53 75.5
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.2e-11 75.1 107 48.6
Ca_27196_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.1e-11 74.3 107 47.7
Ca_02596_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.8e-10 71.2 106 44.3
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.8e-10 71.2 184 27.2
Ca_12020_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.3e-10 70.9 112 42.0
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 3.0e-10 70.5 155 30.3
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 6.8e-10 69.3 256 27.7
Ca_19543_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.8e-10 68.9 97 48.5
Ca_04058_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.2e-09 68.6 107 44.9
Sed0016672 Sechium edule HOM05D000047 ORTHO05D000589 1.5e-09 68.2 216 26.9
Thecc.02G202400 Theobroma cacao HOM05D000047 ORTHO05D000589 1.5e-09 68.2 137 28.5
Ca_19865_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.6e-09 67.4 104 46.2
Ca_27655_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.6e-09 67.4 107 44.9
Ca_28022_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 2.6e-09 67.4 107 45.8
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 4.4e-09 66.6 162 30.9
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 5.7e-09 66.2 105 45.7
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 2.2e-08 64.3 201 27.4
Ca_02710_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.8e-08 63.2 177 32.8
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.4e-07 60.8 214 27.1
Ca_04839_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.1e-07 60.5 199 26.6
Ca_06604_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 7.0e-07 59.3 84 46.4
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-06 58.5 59 50.8
Ca_13589_v3 Cicer arietinum L. HOM05D000047 ORTHO05D018996 1.6e-06 58.2 99 37.4
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.0e-06 57.8 104 37.5
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 2.0e-06 57.8 124 28.2
Sed0026166 Sechium edule HOM05D000047 ORTHO05D011269 2.7e-06 57.4 119 32.8
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 3.5e-06 57.0 179 27.9
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 3.5e-06 57.0 179 28.5
TPR.G14799 Trifolium pratense HOM05D000047 ORTHO05D000589 4.5e-06 56.6 155 30.3
VMungo0540G1619 Vigna mungo HOM05D033456 ORTHO05D030725 4.5e-06 56.6 88 37.5


User provided reference genes

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