Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14912_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 3.1e-63 245.0 123 100.0
Medtr3g462980 Medicago truncatula HOM05D010371 ORTHO05D003507 1.4e-44 183.0 120 79.2
Medtr3g462960 Medicago truncatula HOM05D010371 ORTHO05D003507 1.6e-40 169.5 120 76.7
TPR.G13269 Trifolium pratense HOM05D010371 ORTHO05D003507 2.2e-37 159.1 119 73.1
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 1.5e-30 136.3 119 64.7
VMungo0540G0421 Vigna mungo HOM05D010371 ORTHO05D003507 2.2e-29 132.5 119 62.2
Phvul.006G065200 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 4.9e-29 131.3 116 62.1
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 1.3e-26 123.2 99 66.7
Lj6g0011323 Lotus japonicus HOM05D010371 ORTHO05D003507 1.6e-24 116.3 117 58.1
Ca_05588_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 8.5e-21 104.0 113 53.1
Lalb_Chr10g0103281 Lupinus albus HOM05D010371 ORTHO05D003507 1.4e-20 103.2 118 50.0
LjContig00155g0017503 Lotus japonicus HOM05D010371 ORTHO05D003507 1.2e-19 100.1 114 50.0
arahy.Tifrunner.gnm1.ann1.0452KN Arachis hypogaea HOM05D010371 ORTHO05D003507 1.6e-19 99.8 109 55.0
Phvul.008G262500 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 1.6e-19 99.8 109 54.1
VMungo0647G2148 Vigna mungo HOM05D010371 ORTHO05D003507 2.1e-19 99.4 109 52.3
Medtr5g069980 Medicago truncatula HOM05D010371 ORTHO05D003507 2.7e-19 99.0 108 53.7
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 4.6e-19 98.2 114 50.9
arahy.Tifrunner.gnm1.ann1.N7G3Q4 Arachis hypogaea HOM05D010371 ORTHO05D003507 1.8e-18 96.3 109 54.1
Glyma.02G225600 Glycine max HOM05D010371 ORTHO05D003507 3.0e-18 95.5 109 52.3
Glyma.14G192400 Glycine max HOM05D010371 ORTHO05D003507 3.9e-18 95.1 109 51.4
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 1.1e-17 93.6 115 52.2
Lalb_Chr04g0252311 Lupinus albus HOM05D010371 ORTHO05D003507 9.4e-12 73.9 100 51.0
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.3e-08 63.5 86 43.0
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 2.2e-08 62.8 103 41.7
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 6.3e-08 61.2 81 44.4
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 1.8e-07 59.7 72 47.2
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 2.4e-07 59.3 105 39.0
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 3.1e-07 58.9 80 43.8
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 3.1e-07 58.9 102 36.3
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 4.1e-07 58.5 105 39.0
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 5.3e-07 58.2 103 38.8
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.1e-07 57.4 82 43.9
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.1e-07 57.4 82 43.9
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 9.1e-07 57.4 82 43.9
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 9.1e-07 57.4 104 37.5
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 1.2e-06 57.0 89 37.1
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 2.0e-06 56.2 81 40.7
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.0e-06 56.2 82 41.5
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 3.4e-06 55.5 76 42.1
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 3.4e-06 55.5 78 44.9
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 3.4e-06 55.5 85 44.7
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 3.4e-06 55.5 84 35.7
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 3.4e-06 55.5 80 38.8
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 5.9e-06 54.7 83 39.8
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 5.9e-06 54.7 98 39.8
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 5.9e-06 54.7 84 39.3
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 7.7e-06 54.3 83 43.4
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 7.7e-06 54.3 79 43.0


User provided reference genes

Program Settings