Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 4.9e-79 297.7 152 100.0
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.3e-74 283.1 152 92.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 1.4e-73 279.6 152 93.4
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.3e-71 273.1 152 90.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.3e-68 262.3 152 86.8
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 2.3e-68 262.3 152 87.5
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 5.1e-68 261.2 152 87.5
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 3.7e-66 255.0 152 85.5
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 4.8e-66 254.6 152 85.5
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.6e-64 248.8 152 83.6
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 2.6e-64 248.8 152 83.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 3.0e-60 235.3 156 82.7
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 8.7e-60 233.8 156 80.1
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-59 233.0 156 80.1
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-59 233.0 156 80.1
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.9e-59 232.6 149 80.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 7.4e-59 230.7 159 78.6
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 9.7e-59 230.3 149 79.9
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 80.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.2e-58 229.2 150 82.0
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 80.1
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.7e-58 228.4 156 81.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 4.8e-58 228.0 157 80.9
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 8.2e-58 227.3 159 76.7
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 8.2e-58 227.3 152 78.3
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.8e-57 226.1 157 76.4
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.8e-57 226.1 150 80.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.8e-57 226.1 156 78.2
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 3.1e-57 225.3 157 79.0
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.1e-57 225.3 154 80.5
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 3.1e-57 225.3 155 76.8
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 5.3e-57 224.6 157 78.3
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 6.9e-57 224.2 156 79.5
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 9.0e-57 223.8 156 77.6
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.0e-56 222.6 156 77.6
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 2.0e-56 222.6 156 76.9
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.4e-56 221.9 159 76.1
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 4.5e-56 221.5 154 76.0
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 5.9e-56 221.1 150 79.3
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 5.9e-56 221.1 158 73.4
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 5.9e-56 221.1 155 76.1
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.0e-55 220.3 161 75.2
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.0e-55 220.3 142 81.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 75.6
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 75.6
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.7e-55 219.5 155 76.1
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.2e-55 219.2 157 77.7
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 5.0e-55 218.0 156 76.3
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 2.5e-54 215.7 154 74.0
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.2e-54 215.3 157 75.2
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 4.2e-54 214.9 128 83.6
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 4.2e-54 214.9 154 76.6
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.5e-54 214.5 123 87.8
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 7.2e-54 214.2 156 74.4
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 7.2e-54 214.2 128 85.2
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 7.2e-54 214.2 156 75.6
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 9.4e-54 213.8 156 73.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.2e-53 213.4 127 85.8
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.6e-53 213.0 153 75.8
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.1e-53 212.6 157 72.6
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 73.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.7e-53 212.2 157 72.6
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.7e-53 212.2 156 71.8
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 73.9
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 72.0
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 72.0
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 73.9
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 4.6e-53 211.5 117 87.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.0e-52 210.3 159 71.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.4e-52 209.9 156 73.1
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 3.0e-52 208.8 157 73.2
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 5.1e-52 208.0 153 72.5
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.1e-52 208.0 137 77.4
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 6.7e-52 207.6 156 71.2
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 8.8e-52 207.2 157 73.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-51 206.8 156 71.8
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.1e-51 206.8 158 70.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.5e-51 206.5 153 71.2
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.5e-51 206.5 154 74.0
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 5.7e-51 204.5 123 85.4
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 69.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 117 84.6
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.8e-50 202.2 156 71.2
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 3.7e-50 201.8 116 83.6
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 6.3e-50 201.1 114 90.4
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 8.2e-50 200.7 159 70.4
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 1.4e-49 199.9 160 68.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 158 69.6
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.6e-48 195.7 124 79.0
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 5.2e-44 181.4 126 76.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 6.7e-44 181.0 130 77.7
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.7e-43 177.9 127 78.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 1.1e-41 173.7 118 73.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.8e-41 172.9 121 76.0
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.5e-40 168.7 135 67.4
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.3e-39 166.8 128 72.7
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.9e-39 165.6 144 66.7
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 3.8e-39 165.2 130 72.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 4.2e-38 161.8 107 73.8
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 7.2e-38 161.0 129 70.5
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.2e-37 160.2 157 59.9
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 6.1e-37 157.9 107 79.4
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.8e-36 156.4 104 73.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 4.0e-36 155.2 128 68.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 5.2e-36 154.8 138 65.2
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 4.4e-35 151.8 128 65.6
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.8e-34 148.3 141 61.0
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 4.5e-32 141.7 88 78.4
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.0e-15 87.4 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 8.0e-13 77.8 109 42.2
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.0e-12 75.9 145 35.9
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 3.3e-06 55.8 77 41.6


User provided reference genes

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