Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 3.2e-289 997.7 493 100.0
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 1.8e-226 789.3 492 81.3
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 4.0e-223 778.1 501 79.6
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 4.9e-213 744.6 490 77.1
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 3.5e-211 738.4 490 76.7
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 3.7e-208 728.4 483 76.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 1.4e-207 726.5 493 76.3
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.7e-205 719.5 498 73.3
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.9e-205 718.8 503 72.6
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 9.3e-204 713.8 490 74.1
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 6.1e-203 711.1 489 74.2
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.9e-201 706.1 484 74.0
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 6.3e-184 647.9 488 66.2
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 2.4e-183 646.0 500 65.8
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.6e-182 643.3 498 66.9
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 7.7e-182 641.0 480 65.4
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 8.5e-181 637.5 498 66.5
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 1.9e-180 636.3 504 64.5
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 1.8e-178 629.8 490 66.5
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 8.8e-178 627.5 496 64.9
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.1e-175 620.5 435 68.5
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.4e-175 620.2 485 66.0
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.8e-175 619.8 503 62.4
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.8e-175 619.8 502 64.7
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 7.0e-175 617.8 513 62.6
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 2.0e-174 616.3 488 63.7
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.2e-173 612.8 492 64.4
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.1e-172 610.5 498 63.9
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 2.5e-172 609.4 483 65.6
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.2e-172 609.0 487 64.7
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.7e-171 605.9 480 63.8
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 4.7e-171 605.1 494 64.2
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 8.0e-171 604.4 448 68.3
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.8e-170 603.2 482 65.4
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 6.8e-170 601.3 489 63.2
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 8.3e-168 594.3 485 62.1
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.4e-167 592.8 464 63.8
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 3.1e-167 592.4 478 64.0
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 4.1e-167 592.0 445 65.4
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.1e-167 592.0 441 67.8
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.1e-167 592.0 441 67.3
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 7.0e-167 591.3 441 67.3
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.0e-165 587.4 445 65.4
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.3e-165 587.0 442 66.7
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.9e-165 585.9 492 62.8
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.9e-165 585.9 440 67.7
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.1e-164 583.9 440 67.5
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 1.5e-164 583.6 448 65.4
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 2.5e-164 582.8 474 62.4
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 3.3e-164 582.4 494 60.7
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 4.2e-164 582.0 380 73.2
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 7.2e-164 581.3 433 66.5
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 9.5e-164 580.9 439 63.1
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 2.1e-163 579.7 487 62.0
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 3.6e-163 578.9 457 63.0
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.7e-163 578.6 495 62.0
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 1.0e-162 577.4 462 62.1
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.8e-162 576.6 439 66.3
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 2.3e-162 576.2 473 61.9
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 5.2e-162 575.1 454 63.7
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 8.9e-162 574.3 494 60.3
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 8.9e-162 574.3 430 65.1
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 2.0e-161 573.2 473 62.2
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 9.8e-161 570.9 475 60.0
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.7e-160 570.1 492 59.1
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.7e-160 570.1 451 62.7
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 6.3e-160 568.2 385 70.6
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.4e-159 567.0 504 59.1
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 1.4e-159 567.0 468 62.0
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 1.8e-159 566.6 494 59.7
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 5.4e-159 565.1 492 59.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 5.4e-159 565.1 492 59.1
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 2.7e-158 562.8 463 60.7
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.7e-158 562.8 547 57.2
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 4.5e-158 562.0 539 54.4
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 1.2e-155 553.9 450 62.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.6e-155 553.5 493 58.2
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 3.6e-155 552.4 477 59.1
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 4.7e-155 552.0 461 60.7
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.3e-154 549.7 366 72.7
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.0e-153 546.6 500 57.4
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 2.2e-152 543.1 506 56.1
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 3.5e-150 535.8 510 58.0
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 6.0e-150 535.0 448 62.3
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 6.2e-147 525.0 490 57.1
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.5e-145 520.4 480 57.9
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 8.3e-144 514.6 412 62.9
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 5.4e-143 511.9 432 59.7
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 7.0e-143 511.5 448 57.8
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.7e-142 509.6 654 45.6
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.3e-141 507.3 433 59.8
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.7e-141 506.9 442 60.0
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 2.8e-139 499.6 489 55.4
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.0e-137 493.4 431 58.7
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 4.4e-137 492.3 378 65.1
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 6.9e-114 415.2 256 75.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.3e-109 401.0 335 58.2
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 1.9e-92 344.0 236 71.2
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 2.0e-84 317.4 189 75.7
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 5.5e-79 299.3 290 54.5
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 2.6e-76 290.4 178 75.8
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 5.3e-74 282.7 285 54.7
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.7e-72 277.7 573 33.7
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 2.2e-72 277.3 256 57.4
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.9e-69 266.5 222 55.0
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.3e-67 261.5 284 52.1
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.0e-66 255.8 158 74.1
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 1.2e-57 228.4 588 30.3
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 7.7e-57 225.7 634 28.5
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 1.1e-55 221.9 247 49.4
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.3e-53 214.2 454 32.4
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.1e-38 164.5 365 32.6
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.4e-37 161.8 124 67.7
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.9e-35 154.1 165 51.5
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 9.2e-26 122.5 108 55.6
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.7e-25 120.9 85 64.7
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 5.8e-20 103.2 61 72.1
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 6.0e-17 93.2 163 36.8
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.0e-16 90.9 58 65.5
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.8e-13 81.6 154 33.8
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 6.4e-11 73.2 85 49.4
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.1e-09 68.2 78 48.7
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 6.0e-09 66.6 160 28.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 2.3e-08 64.7 42 64.3
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 2.3e-08 64.7 67 44.8
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 4.8e-06 57.0 42 59.5


User provided reference genes

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