Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 2.0e-71 272.3 135 100.0
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 4.3e-66 254.6 132 95.5
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 5.6e-66 254.2 135 94.1
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 3.6e-65 251.5 135 92.6
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 6.1e-65 250.8 135 91.9
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 1.5e-63 246.1 135 91.1
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 2.2e-62 242.3 135 89.6
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 6.4e-62 240.7 135 88.1
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 3.2e-61 238.4 135 86.7
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 1.2e-60 236.5 135 88.9
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 1.4e-53 213.0 132 81.1
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 2.4e-53 212.2 132 80.3
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 7.0e-53 210.7 132 79.5
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 9.2e-53 210.3 132 80.3
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 1.6e-52 209.5 135 79.3
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 2.7e-52 208.8 132 79.5
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 1.0e-51 206.8 135 77.8
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 1.0e-51 206.8 132 78.8
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 1.7e-51 206.1 132 78.8
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 5.0e-51 204.5 135 77.0
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 5.0e-51 204.5 135 77.8
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 5.0e-51 204.5 132 75.0
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 6.6e-51 204.1 130 80.0
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 6.6e-51 204.1 135 75.6
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 8.6e-51 203.8 134 76.9
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 8.6e-51 203.8 137 73.0
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 8.6e-51 203.8 139 75.5
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 1.1e-50 203.4 132 78.0
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 1.5e-50 203.0 134 76.1
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 1.5e-50 203.0 137 74.5
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.9e-50 202.6 135 77.0
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 2.5e-50 202.2 137 73.7
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 2.5e-50 202.2 134 76.1
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 2.5e-50 202.2 134 76.1
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 3.3e-50 201.8 131 76.3
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 3.3e-50 201.8 135 77.0
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 4.3e-50 201.4 133 72.2
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 1.6e-49 199.5 134 73.9
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 2.1e-49 199.1 130 75.4
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 6.2e-49 197.6 125 78.4
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 6.2e-49 197.6 132 75.0
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 6.2e-49 197.6 135 72.6
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 1.4e-48 196.4 128 77.3
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.8e-48 196.1 135 74.1
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 5.2e-48 194.5 135 68.9
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 5.2e-48 194.5 127 73.2
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 6.8e-48 194.1 124 78.2
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 1.5e-47 193.0 127 75.6
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 3.4e-47 191.8 128 74.2
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 5.8e-47 191.0 132 72.7
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 1.7e-46 189.5 132 70.5
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 1.7e-46 189.5 141 68.8
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 3.7e-46 188.3 107 85.0
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 3.7e-46 188.3 130 71.5
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 3.7e-46 188.3 130 71.5
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 6.4e-46 187.6 107 85.0
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 6.4e-46 187.6 107 84.1
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 6.4e-46 187.6 132 70.5
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 8.3e-46 187.2 132 72.0
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 1.1e-45 186.8 126 71.4
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 1.1e-45 186.8 126 71.4
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 1.4e-45 186.4 107 83.2
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 3.2e-45 185.3 126 70.6
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 3.2e-45 185.3 130 70.8
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 4.1e-45 184.9 122 77.0
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 5.4e-45 184.5 136 68.4
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 1.2e-44 183.3 121 74.4
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 1.2e-44 183.3 130 68.5
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 1.2e-44 183.3 107 83.2
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 1.6e-44 183.0 127 69.3
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 2.1e-44 182.6 157 60.5
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 4.6e-44 181.4 107 82.2
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 6.0e-44 181.0 107 80.4
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 7.8e-44 180.6 107 80.4
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 1.3e-43 179.9 125 69.6
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 3.0e-43 178.7 114 75.4
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 3.0e-43 178.7 127 70.1
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 3.0e-43 178.7 126 68.3
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 3.0e-43 178.7 130 65.4
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 3.0e-43 178.7 132 67.4
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 1.1e-42 176.8 118 71.2
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.5e-42 176.4 107 80.4
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 1.9e-42 176.0 118 71.2
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 1.9e-42 176.0 118 71.2
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 4.3e-42 174.9 118 70.3
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 7.3e-42 174.1 106 78.3
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 1.8e-40 169.5 96 87.5
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 2.3e-40 169.1 116 72.4
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 4.4e-39 164.9 107 72.9
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 3.2e-37 158.7 85 94.1
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 5.8e-31 137.9 141 48.9
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 7.6e-31 137.5 102 59.8
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 1.7e-30 136.3 95 68.4
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 9.3e-29 130.6 72 84.7
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 3.5e-28 128.6 104 57.7
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 8.7e-27 124.0 91 69.2
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 1.9e-26 122.9 115 60.9
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 1.9e-26 122.9 115 60.9
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.3e-26 122.1 86 75.6
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 4.3e-26 121.7 71 80.3
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 1.3e-25 120.2 87 71.3
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 1.6e-25 119.8 89 71.9
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 3.6e-25 118.6 89 71.9
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.8e-24 116.3 86 72.1
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 1.7e-22 109.8 73 76.7
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 2.2e-22 109.4 70 74.3
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 2.9e-22 109.0 81 66.7
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 1.1e-21 107.1 81 65.4
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 5.4e-21 104.8 99 47.5
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 2.1e-17 92.8 47 89.4
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 3.8e-14 82.0 64 68.8
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 4.9e-14 81.6 62 74.2
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 1.1e-13 80.5 61 68.9
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 9.3e-13 77.4 66 60.6
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 1.6e-12 76.6 72 56.9
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 1.8e-11 73.2 57 52.6
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 2.5e-10 69.3 61 55.7
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 3.3e-10 68.9 63 58.7


User provided reference genes

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