Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.6e-82 309.3 148 100.0
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 1.7e-71 272.7 148 87.2
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 2.8e-71 271.9 146 87.0
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.0e-68 263.5 148 85.8
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.2e-66 256.5 144 84.0
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.2e-66 256.5 148 81.8
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 3.6e-66 255.0 145 85.5
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 3.6e-66 255.0 145 85.5
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 6.1e-66 254.2 144 83.3
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 6.1e-66 254.2 146 80.1
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 8.0e-66 253.8 145 84.8
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 1.0e-65 253.4 144 84.7
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 3.0e-65 251.9 151 80.1
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 5.2e-65 251.1 152 78.3
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 8.8e-65 250.4 148 79.7
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 8.8e-65 250.4 151 76.8
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 8.8e-65 250.4 145 83.4
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 1.1e-64 250.0 148 79.7
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.6e-64 248.8 147 80.3
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 3.3e-64 248.4 148 80.4
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 7.4e-64 247.3 148 77.7
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.8e-63 245.4 148 77.7
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 1.1e-62 243.4 150 75.3
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 1.1e-62 243.4 147 77.6
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.8e-62 242.7 135 83.0
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 4.1e-62 241.5 135 83.0
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.0e-62 240.7 148 76.4
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.6e-61 239.6 141 80.1
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.6e-61 238.8 138 79.7
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 2.6e-61 238.8 143 80.4
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.5e-61 238.4 149 76.5
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 3.5e-61 238.4 125 84.8
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 5.9e-61 237.7 154 74.0
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 5.9e-61 237.7 139 80.6
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 5.9e-61 237.7 148 75.0
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 7.7e-61 237.3 148 75.7
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 7.7e-61 237.3 148 73.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 7.7e-61 237.3 148 73.0
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 7.7e-61 237.3 136 80.1
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 1.0e-60 236.9 148 75.7
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 1.3e-60 236.5 148 77.0
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 1.7e-60 236.1 145 75.2
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 2.2e-60 235.7 148 75.0
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 2.2e-60 235.7 148 76.4
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.8e-60 235.0 148 70.9
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.0e-60 234.6 148 70.9
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 5.0e-60 234.6 143 75.5
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 6.5e-60 234.2 147 72.1
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 6.5e-60 234.2 130 80.8
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.5e-60 234.2 149 74.5
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 6.5e-60 234.2 148 75.7
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.1e-59 233.4 148 71.6
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 2.5e-59 232.3 121 86.0
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 2.5e-59 232.3 148 75.0
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 3.2e-59 231.9 148 72.3
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 5.5e-59 231.1 148 73.6
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 7.2e-59 230.7 148 73.0
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 7.2e-59 230.7 146 73.3
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 1.2e-58 229.9 133 79.7
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 2.7e-58 228.8 145 75.2
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.6e-58 228.4 148 73.6
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 4.7e-58 228.0 148 73.0
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 6.1e-58 227.6 132 76.5
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 8.0e-58 227.3 123 83.7
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 8.0e-58 227.3 145 74.5
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.0e-57 226.9 148 68.9
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.4e-57 226.5 146 68.5
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.8e-57 226.1 146 68.5
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 2.3e-57 225.7 142 73.9
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.0e-56 222.6 146 68.5
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.0e-56 222.6 147 71.4
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 3.3e-56 221.9 124 80.6
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 5.7e-56 221.1 147 70.1
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 7.5e-56 220.7 137 73.7
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 7.5e-56 220.7 185 60.5
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 9.7e-56 220.3 148 70.3
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 2.2e-55 219.2 137 73.7
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.2e-55 219.2 163 65.6
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 3.7e-55 218.4 150 71.3
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 1.1e-54 216.9 146 67.8
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 2.4e-54 215.7 146 67.1
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 2.4e-54 215.7 146 67.1
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 2.4e-54 215.7 143 72.7
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 3.1e-54 215.3 137 71.5
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 4.1e-54 214.9 146 67.1
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 4.1e-54 214.9 142 70.4
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 7.0e-54 214.2 146 67.1
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 7.0e-54 214.2 146 67.1
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 7.0e-54 214.2 146 66.4
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 7.0e-54 214.2 146 67.1
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 7.0e-54 214.2 134 73.1
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 7.0e-54 214.2 146 66.4
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 2.0e-53 212.6 146 66.4
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 2.7e-53 212.2 146 66.4
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 7.7e-53 210.7 205 55.1
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.2e-52 209.1 137 70.1
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 2.2e-52 209.1 134 69.4
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.8e-52 208.4 134 72.4
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 5.0e-52 208.0 146 63.7
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 5.0e-52 208.0 133 72.2
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 5.0e-52 208.0 147 66.7
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 4.2e-51 204.9 142 68.3
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 7.2e-51 204.1 121 72.7
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 2.1e-50 202.6 134 67.9
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.4e-49 199.9 113 84.1
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.2e-48 196.8 135 67.4
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 1.5e-48 196.4 135 65.9
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 2.8e-47 192.2 127 73.2
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 4.8e-47 191.4 179 57.0
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 3.8e-44 181.8 109 77.1
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.8e-41 172.9 96 83.3
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 5.2e-41 171.4 93 82.8
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 6.8e-41 171.0 101 78.2
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 6.8e-41 171.0 94 80.9
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 1.1e-35 153.7 96 77.1
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.0e-33 147.1 97 68.0
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 5.8e-32 141.4 120 60.8
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 5.4e-22 108.2 109 56.0
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 4.7e-18 95.1 66 71.2
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 5.2e-17 91.7 43 88.4
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.4e-14 83.6 53 75.5
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 3.0e-12 75.9 52 63.5
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.4e-09 66.2 35 91.4
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 4.4e-08 62.0 49 59.2


User provided reference genes

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