Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14683_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 5.4e-133 477.6 236 100.0
Ca_26120_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 6.2e-121 437.6 238 93.3
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 9.6e-106 387.1 232 84.1
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 8.1e-105 384.0 233 83.3
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 1.7e-102 376.3 231 82.7
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 1.1e-101 373.6 233 81.5
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 5.4e-101 371.3 234 80.3
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 2.7e-100 369.0 232 80.6
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 3.3e-98 362.1 234 80.3
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 7.4e-98 360.9 234 77.4
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 2.1e-97 359.4 233 77.3
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 1.3e-94 350.1 219 81.3
Dinv33387 Davidia involucrata HOM05D004846 ORTHO05D005630 1.0e-86 323.9 232 69.0
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 1.3e-86 323.6 233 70.8
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 1.3e-86 323.6 233 71.2
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 1.3e-86 323.6 234 70.1
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 5.0e-86 321.6 234 70.5
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 5.0e-86 321.6 235 68.5
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 8.4e-86 320.9 233 70.0
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 1.9e-85 319.7 238 68.1
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 3.2e-85 318.9 232 68.1
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 3.2e-85 318.9 233 67.0
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 7.1e-85 317.8 220 72.3
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 1.2e-84 317.0 234 67.1
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 2.7e-84 315.8 234 69.2
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 4.6e-84 315.1 234 68.8
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 1.0e-83 313.9 232 68.1
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 1.0e-83 313.9 234 67.5
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 1.3e-83 313.5 212 73.1
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 3.0e-83 312.4 234 65.8
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 3.0e-83 312.4 232 67.7
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 3.0e-83 312.4 231 67.5
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 3.0e-83 312.4 231 66.7
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.9e-83 312.0 231 67.5
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 5.1e-83 311.6 235 66.4
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 6.7e-83 311.2 234 66.7
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 6.7e-83 311.2 233 68.7
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 1.5e-82 310.1 233 68.7
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 2.5e-82 309.3 231 67.5
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 2.5e-82 309.3 234 66.2
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 3.3e-82 308.9 233 67.0
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 7.4e-82 307.8 233 66.5
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 1.3e-81 307.0 234 65.4
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 1.6e-81 306.6 233 68.2
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 2.2e-81 306.2 234 65.8
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 3.7e-81 305.4 234 65.8
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 4.8e-81 305.1 234 66.7
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 6.3e-81 304.7 234 65.8
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 8.2e-81 304.3 231 67.5
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 8.2e-81 304.3 237 66.7
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 1.4e-80 303.5 233 66.5
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 2.4e-80 302.8 234 65.4
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 3.1e-80 302.4 228 66.7
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 4.1e-80 302.0 233 65.2
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 5.3e-80 301.6 235 66.4
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 5.3e-80 301.6 234 65.0
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 5.3e-80 301.6 233 66.1
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 6.9e-80 301.2 234 65.0
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 6.9e-80 301.2 223 66.8
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 6.9e-80 301.2 233 64.8
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 9.0e-80 300.8 228 65.8
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 1.2e-79 300.4 229 68.1
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 2.6e-79 299.3 232 67.2
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.4e-79 298.9 213 69.5
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 3.4e-79 298.9 213 69.5
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 3.4e-79 298.9 233 65.7
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 7.7e-79 297.7 233 63.1
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 7.7e-79 297.7 203 72.9
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 7.7e-79 297.7 233 65.2
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 2.9e-78 295.8 233 64.4
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 3.8e-78 295.4 237 64.1
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 5.0e-78 295.0 229 64.6
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 5.0e-78 295.0 233 63.5
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 6.5e-78 294.7 231 65.8
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 1.1e-77 293.9 233 63.1
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 1.4e-77 293.5 237 63.3
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 1.4e-77 293.5 237 63.3
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 2.5e-77 292.7 237 63.7
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 2.5e-77 292.7 237 63.7
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 2.5e-77 292.7 237 64.1
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 5.5e-77 291.6 237 63.3
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 5.5e-77 291.6 237 63.7
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 7.2e-77 291.2 213 68.1
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 7.2e-77 291.2 231 63.2
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 9.4e-77 290.8 231 65.4
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 9.4e-77 290.8 231 65.4
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 1.6e-76 290.0 218 67.4
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 1.6e-76 290.0 231 64.9
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 2.7e-76 289.3 237 62.9
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 2.7e-76 289.3 226 64.2
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 2.3e-75 286.2 228 62.7
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 1.1e-74 283.9 237 61.2
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 1.5e-74 283.5 226 61.9
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 2.0e-74 283.1 279 57.0
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 2.5e-74 282.7 231 63.6
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 5.7e-74 281.6 231 63.6
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 2.8e-73 279.3 203 68.0
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 3.7e-73 278.9 206 66.5
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 8.2e-73 277.7 206 67.5
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 3.1e-72 275.8 203 68.0
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 1.2e-71 273.9 233 60.9
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 2.0e-71 273.1 221 61.5
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 7.2e-69 264.6 208 62.0
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 9.4e-69 264.2 208 62.5
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 1.2e-68 263.8 234 59.4
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 3.6e-68 262.3 199 66.8
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 1.8e-67 260.0 227 58.1
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 2.3e-67 259.6 233 57.5
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 5.1e-67 258.5 208 61.1
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 4.4e-66 255.4 233 57.9
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 4.4e-66 255.4 228 58.3
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 7.4e-66 254.6 233 58.8
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 2.8e-65 252.7 284 49.6
SHI03857 Sapria himalayana HOM05D004846 ORTHO05D000023 3.1e-64 249.2 228 57.0
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 2.9e-62 242.7 231 56.3
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 7.5e-58 228.0 230 55.2
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 2.4e-56 223.0 208 57.7
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 3.2e-53 212.6 231 49.8
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 2.7e-52 209.5 208 51.9
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 3.6e-52 209.1 213 53.1
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 3.4e-50 202.6 215 49.8
unitig_748.g6968 Utricularia gibba HOM05D004846 ORTHO05D005630 1.3e-41 174.1 129 65.9
CBR_g922 Chara braunii HOM05D004846 ORTHO05D005630 7.7e-39 164.9 193 46.1
Actinidia36162 Actinidia chinensis HOM05D004846 ORTHO05D005630 9.5e-37 157.9 156 52.6
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 7.3e-29 131.7 94 70.2
Cfa027235 Carpinus fangiana HOM05D004846 ORTHO05D005630 2.9e-25 119.8 179 36.9
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 3.9e-22 109.4 108 50.9
Cpa.g.c47899 Carica papaya HOM05D004846 ORTHO05D005630 1.7e-17 94.0 58 70.7
MCO12G012 Micromonas commoda HOM05D004846 ORTHO05D005630 9.5e-13 78.2 203 29.6
Cre08.g363950 Chlamydomonas reinhardtii HOM05D004846 ORTHO05D005630 1.7e-09 67.4 161 31.1


User provided reference genes

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