Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.9e-131 471.5 240 100.0
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 4.5e-103 378.3 246 80.9
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 5.9e-103 377.9 240 83.8
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 8.5e-102 374.0 246 80.1
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.6e-100 369.8 247 79.4
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 6.8e-99 364.4 244 76.6
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 1.3e-97 360.1 244 76.2
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 1.4e-96 356.7 244 75.8
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 7.0e-96 354.4 243 75.3
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.0e-90 336.3 240 74.6
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 2.0e-90 336.3 248 71.8
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 2.9e-89 332.4 246 71.5
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 4.9e-89 331.6 240 73.8
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 3.2e-88 328.9 246 71.1
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 6.4e-81 304.7 246 66.7
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.1e-80 303.9 246 64.6
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 5.4e-80 301.6 246 64.6
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 5.4e-80 301.6 246 65.9
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 3.5e-79 298.9 247 65.2
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 7.8e-79 297.7 247 64.8
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.0e-78 297.4 246 65.4
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 2.3e-78 296.2 244 62.7
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 6.6e-78 294.7 253 62.5
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 6.6e-78 294.7 253 62.5
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 1.1e-77 293.9 247 62.8
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.1e-77 293.9 244 62.3
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.1e-77 293.9 250 63.2
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.5e-77 293.5 247 64.8
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 2.5e-77 292.7 242 62.8
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 4.3e-77 292.0 243 64.6
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 9.5e-77 290.8 241 63.5
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 2.8e-76 289.3 245 64.5
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.8e-76 289.3 244 60.7
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 2.8e-76 289.3 243 63.8
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.6e-76 288.9 244 60.7
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.7e-76 288.5 244 61.5
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 8.1e-76 287.7 244 60.7
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.3e-75 286.2 244 60.7
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.0e-75 285.4 247 61.9
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 4.0e-75 285.4 244 60.2
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 5.2e-75 285.0 247 61.5
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 6.8e-75 284.6 247 61.5
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.5e-74 283.5 247 63.2
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 2.0e-74 283.1 237 63.3
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.0e-74 283.1 244 60.2
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 3.4e-74 282.3 216 70.8
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 7.5e-74 281.2 245 61.6
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 7.5e-74 281.2 245 61.6
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.3e-73 280.4 237 61.6
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.7e-73 280.0 236 62.7
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 3.7e-73 278.9 245 61.6
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.9e-73 278.5 281 56.9
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 8.3e-73 277.7 248 61.7
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 2.4e-72 276.2 247 61.5
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 4.1e-72 275.4 244 61.1
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 5.4e-72 275.0 240 60.0
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 5.4e-72 275.0 246 60.2
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.2e-71 273.9 246 59.8
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 4.6e-71 271.9 240 59.6
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 4.6e-71 271.9 235 59.6
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 1.0e-70 270.8 242 58.7
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.0e-70 270.8 241 59.8
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.7e-70 270.0 242 57.9
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.7e-70 270.0 240 58.8
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.7e-70 270.0 246 58.9
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 2.3e-70 269.6 242 57.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.3e-70 269.6 242 57.9
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 2.3e-70 269.6 240 58.8
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.3e-70 269.6 227 62.1
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 3.9e-70 268.9 247 60.3
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 6.6e-70 268.1 240 57.9
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 6.6e-70 268.1 240 57.9
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 8.6e-70 267.7 240 58.3
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 8.6e-70 267.7 240 58.3
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-69 266.9 240 58.3
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 1.9e-69 266.5 240 57.9
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.9e-69 266.5 240 58.3
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.9e-69 266.5 246 58.1
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 3.3e-69 265.8 241 58.5
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 5.6e-69 265.0 240 57.9
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 7.3e-69 264.6 244 59.4
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 7.3e-69 264.6 227 60.8
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 2.8e-68 262.7 240 58.3
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.2e-68 261.5 230 60.0
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 8.1e-68 261.2 237 58.6
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 3.1e-67 259.2 240 58.8
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 3.1e-67 259.2 239 59.0
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 3.4e-66 255.8 251 56.2
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 6.4e-65 251.5 196 66.8
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 1.9e-64 250.0 230 60.9
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.6e-63 245.4 235 56.6
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.3e-62 243.8 223 59.2
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.7e-62 243.4 257 56.0
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.8e-59 233.4 233 54.9
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 1.8e-59 233.4 241 55.2
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 1.2e-58 230.7 237 54.9
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.5e-58 230.3 320 45.6
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 6.4e-57 224.9 230 55.2
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 8.4e-57 224.6 227 54.2
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 7.1e-56 221.5 245 54.7
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 9.3e-56 221.1 200 61.5
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 3.5e-55 219.2 185 64.3
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.3e-54 216.5 245 54.7
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 3.9e-54 215.7 196 59.7
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 1.5e-53 213.8 222 52.3
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.5e-53 213.8 245 53.9
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 3.3e-53 212.6 245 53.5
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 3.6e-52 209.1 233 49.4
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 6.2e-52 208.4 244 52.9
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 9.3e-48 194.5 237 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 4.6e-47 192.2 228 47.8
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 1.9e-45 186.8 143 63.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 5.6e-45 185.3 233 43.3
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 2.1e-44 183.3 132 76.5
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 8.1e-44 181.4 249 45.0
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 4.2e-40 169.1 231 44.2
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 7.1e-40 168.3 185 54.6
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.0e-38 164.5 164 57.9
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.8e-36 156.4 87 93.1
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.0e-35 152.5 157 52.9
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.4e-32 144.1 135 60.7
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 3.2e-32 142.9 87 83.9
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 4.2e-24 115.9 131 53.4
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.2e-23 114.4 63 92.1
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-23 114.0 79 68.4
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 1.6e-23 114.0 79 68.4
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 3.0e-22 109.8 222 34.2
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.7e-20 104.0 84 61.9
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 6.9e-19 98.6 207 33.3
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 3.9e-14 82.8 61 60.7
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 7.2e-08 62.0 46 58.7
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 2.1e-07 60.5 47 57.4


User provided reference genes

Program Settings