Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14608_v3 Cicer arietinum L. HOM05D007704 ORTHO05D009758 4.8e-97 357.8 182 100.0
TPR.G16762 Trifolium pratense HOM05D007704 ORTHO05D009758 3.4e-74 282.0 177 81.9
Psat0s3897g0040 Pisum sativum HOM05D007704 ORTHO05D009758 3.8e-70 268.5 178 78.1
Medtr3g047590 Medicago truncatula HOM05D007704 ORTHO05D009758 6.5e-70 267.7 178 80.3
Glyma.08G308800 Glycine max HOM05D007704 ORTHO05D009758 5.7e-58 228.0 180 71.1
Lj6g0009873 Lotus japonicus HOM05D007704 ORTHO05D009758 3.5e-55 218.8 228 58.8
Phvul.006G032200 Phaseolus vulgaris HOM05D007704 ORTHO05D009758 5.0e-54 214.9 180 70.0
VMungo0540G0710 Vigna mungo HOM05D007704 ORTHO05D009758 1.1e-53 213.8 169 68.6
Glyma.18G107800 Glycine max HOM05D007704 ORTHO05D009758 6.2e-52 208.0 178 65.2
arahy.Tifrunner.gnm1.ann1.Q0GQHR Arachis hypogaea HOM05D007704 ORTHO05D009758 1.1e-48 197.2 179 63.1
arahy.Tifrunner.gnm1.ann1.I86J5P Arachis hypogaea HOM05D007704 ORTHO05D009758 2.4e-48 196.1 179 62.6
QL08p044652 Quercus lobata HOM05D007704 ORTHO05D009758 3.9e-38 162.2 178 53.4
Haze_13518 Corylus avellana HOM05D007704 ORTHO05D009758 2.2e-33 146.4 189 47.6
COL.COLO4_08458 Corchorus olitorius HOM05D007704 ORTHO05D009758 1.9e-32 143.3 171 47.4
Prupe.3G174900 Prunus persica HOM05D007704 ORTHO05D009758 6.0e-31 138.3 171 48.0
MD17G1137700 Malus domestica HOM05D007704 ORTHO05D009758 1.3e-30 137.1 179 44.1
RcHm_v2.0_Chr2g0151721 Rosa chinensis HOM05D007704 ORTHO05D009758 1.3e-30 137.1 173 46.8
FAN09G1582 Fragaria x ananassa HOM05D007704 ORTHO05D009758 2.3e-30 136.3 181 46.4
Potri.002G058800 Populus trichocarpa HOM05D007704 ORTHO05D009758 2.3e-30 136.3 189 46.6
FvH4_6g38482 Fragaria vesca HOM05D007704 ORTHO05D009758 5.1e-30 135.2 171 49.1
FAN14G3331 Fragaria x ananassa HOM05D007704 ORTHO05D009758 5.1e-30 135.2 171 49.1
Sabra02G0047700 Salix brachista HOM05D007704 ORTHO05D009758 5.1e-30 135.2 179 47.5
FvH4_6g38470 Fragaria vesca HOM05D007704 ORTHO05D009758 1.1e-29 134.0 170 47.6
Thecc.01G163800 Theobroma cacao HOM05D007704 ORTHO05D009758 3.3e-29 132.5 181 44.2
Ciclev10032332m.g Citrus clementina HOM05D007704 ORTHO05D009758 1.1e-27 127.5 176 44.9
FAN02G0747 Fragaria x ananassa HOM05D007704 ORTHO05D009758 1.4e-27 127.1 182 43.4
GSVIVG01020855001 Vitis vinifera HOM05D007704 ORTHO05D009758 6.9e-27 124.8 171 43.3
Atru.chr6.2068_Atru.chr6.2069 Acer truncatum HOM05D007704 ORTHO05D009758 1.2e-26 124.0 177 45.2
Cpa.g.sc50.98 Carica papaya HOM05D007704 ORTHO05D009758 2.6e-26 122.9 164 40.9
Eucgr.A01992 Eucalyptus grandis HOM05D007704 ORTHO05D009758 2.9e-25 119.4 173 42.2
Gorai.012G040100 Gossypium raimondii HOM05D007704 ORTHO05D009758 9.3e-24 114.4 172 40.1
Gohir.D04G035566 Gossypium hirsutum HOM05D007704 ORTHO05D009758 1.6e-23 113.6 172 40.1
TWI59G0036 Tripterygium wilfordii HOM05D007704 ORTHO05D009758 4.6e-23 112.1 177 42.4
TAR626G0172 Trochodendron aralioides HOM05D007704 ORTHO05D009758 1.0e-22 110.9 167 42.5
Gohir.A05G379900 Gossypium hirsutum HOM05D007704 ORTHO05D009758 3.0e-22 109.4 173 41.0
Sed0015338 Sechium edule HOM05D007704 ORTHO05D009758 5.1e-22 108.6 166 42.2
Nn3g20648 Nelumbo nucifera HOM05D007704 ORTHO05D009758 1.6e-20 103.6 157 43.3
THA.LOC104800828 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 8.1e-20 101.3 154 45.5
MBI07_g07812_MAGBIO Magnolia biondii HOM05D007704 ORTHO05D009758 1.8e-19 100.1 160 42.5
Cc05_g09660 Coffea canephora HOM05D007704 ORTHO05D009758 3.1e-19 99.4 191 40.3
DCAR_013319 Daucus carota HOM05D007704 ORTHO05D009758 3.1e-19 99.4 129 48.8
AT1G06500 Arabidopsis thaliana HOM05D007704 ORTHO05D009758 4.0e-19 99.0 153 41.8
CAN.G164.20 Capsicum annuum HOM05D007704 ORTHO05D009758 6.9e-19 98.2 154 40.3
PGR042G3448 Punica granatum HOM05D007704 ORTHO05D009758 9.0e-19 97.8 154 44.2
BcaC07g42062 Brassica carinata HOM05D007704 ORTHO05D009758 2.6e-18 96.3 145 44.8
AL1G16520 Arabidopsis lyrata HOM05D007704 ORTHO05D009758 1.3e-17 94.0 153 41.8
A09p66950 Brassica napus HOM05D000230 ORTHO05D000176 1.3e-17 94.0 154 40.9
BraA09t42030Z Brassica rapa HOM05D000230 ORTHO05D000176 1.3e-17 94.0 154 40.9
Sp1g05260 Schrenkiella parvula HOM05D007704 ORTHO05D009758 1.3e-17 94.0 153 38.6
PGSC0003DMG400007847 Solanum tuberosum HOM05D007704 ORTHO05D009758 1.3e-17 94.0 143 37.8
C08p51180 Brassica napus HOM05D007704 ORTHO05D009758 2.2e-17 93.2 144 41.7
BolC8t52645H Brassica oleracea HOM05D000230 ORTHO05D000176 2.2e-17 93.2 144 41.7
Sopen12g006550 Solanum pennellii HOM05D007704 ORTHO05D009758 2.2e-17 93.2 143 39.2
Solyc12g011190.2 Solanum lycopersicum HOM05D007704 ORTHO05D009758 6.4e-17 91.7 143 38.5
Aqoxy4G00112 Aquilegia oxysepala HOM05D007704 ORTHO05D009758 1.1e-16 90.9 142 43.7
Carub.0001s0586 Capsella rubella HOM05D007704 ORTHO05D009758 1.1e-16 90.9 144 43.1
FAN05G1345 Fragaria x ananassa HOM05D007704 ORTHO05D009758 1.9e-16 90.1 160 37.5
MSTRG.15037 Avicennia marina HOM05D007704 ORTHO05D009758 4.2e-16 89.0 156 37.2
Eucgr.A01996 Eucalyptus grandis HOM05D007704 ORTHO05D009758 7.1e-16 88.2 140 38.6
Peaxi162Scf00789g00013 Petunia axillaris HOM05D007704 ORTHO05D009758 9.3e-16 87.8 145 40.0
Migut.M00569 Erythranthe guttata HOM05D007704 ORTHO05D009758 1.6e-15 87.0 154 39.0
Eucgr.A02009 Eucalyptus grandis HOM05D007704 ORTHO05D009758 2.1e-15 86.7 140 38.6
EL10Ac4g10303 Beta vulgaris HOM05D007704 ORTHO05D009758 3.5e-15 85.9 168 39.9
Thhalv10009066m.g Eutrema salsugineum HOM05D007704 ORTHO05D009758 4.6e-15 85.5 153 39.9
AUR62000092 Chenopodium quinoa HOM05D007704 ORTHO05D009758 6.0e-15 85.1 156 39.1
CARHR006110 Cardamine hirsuta HOM05D007704 ORTHO05D009758 1.0e-14 84.3 150 36.7
ATR0757G094 Amborella trichopoda HOM05D007704 ORTHO05D009758 2.3e-14 83.2 163 36.2
THA.LOC104827393 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 3.9e-14 82.4 125 41.6
SGA_v2.0_scaffold70G23621 Striga asiatica HOM05D007704 ORTHO05D009758 2.5e-13 79.7 121 40.5
Mapoly0023s0099 Marchantia polymorpha HOM05D007704 ORTHO05D009758 3.3e-13 79.3 186 32.8
AagrBONN_evm.TU.Sc2ySwM_344.3472 Anthoceros agrestis HOM05D007704 ORTHO05D009758 9.6e-13 77.8 128 40.6
Nitab4.5_0001232g0110 Nicotiana tabacum HOM05D007704 ORTHO05D009758 2.1e-12 76.6 142 35.2
Pp3c17_13710 Physcomitrium patens HOM05D007704 ORTHO05D009758 2.1e-12 76.6 170 32.9
Sc16g0011630 Simmondsia chinensis HOM05D007704 ORTHO05D009758 2.8e-12 76.3 162 37.0
CDE09G0200 Ceratophyllum demersum HOM05D007704 ORTHO05D009758 5.3e-11 72.0 153 32.0
Ah.06g193590 Amaranthus hybridus HOM05D003002 ORTHO05D003583 6.9e-11 71.6 155 32.9
Hund07540 Selenicereus undatus HOM05D008449 ORTHO05D010615 5.8e-10 68.6 154 33.8
SEGI_16323 Sequoiadendron giganteum HOM05D007704 ORTHO05D009758 2.2e-09 66.6 193 29.0
unitig_85.g27396 Utricularia gibba HOM05D007704 ORTHO05D009758 2.2e-09 66.6 146 32.2
Zm00001eb118790 Zea mays HOM05D007704 ORTHO05D009758 2.2e-09 66.6 128 36.7
Os01g0246500 Oryza sativa ssp. japonica HOM05D007704 ORTHO05D009758 6.4e-09 65.1 171 31.6
Aa31LG1G7580 Aethionema arabicum HOM05D007704 ORTHO05D009758 5.5e-08 62.0 135 34.8
AUR62019264 Chenopodium quinoa HOM05D007704 ORTHO05D009758 9.3e-08 61.2 212 29.7
HPP92_003909 Vanilla planifolia HOM05D007704 ORTHO05D009758 2.1e-07 60.1 145 33.1
ClCG09G022520 Citrullus lanatus HOM05D007704 ORTHO05D009758 7.9e-07 58.2 116 35.3
HPP92_003903 Vanilla planifolia HOM05D007704 ORTHO05D009758 2.3e-06 56.6 145 32.4


User provided reference genes

Program Settings