Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14577_v3 Cicer arietinum L. HOM05D005674 ORTHO05D007015 3.4e-75 286.6 449 100.0
Psat0s443g0080 Pisum sativum HOM05D005674 ORTHO05D007015 6.2e-53 212.6 449 82.2
TPR.G14745 Trifolium pratense HOM05D005674 ORTHO05D007015 1.2e-51 208.4 446 79.8
TPR.G15161 Trifolium pratense HOM05D005674 ORTHO05D007015 1.9e-46 191.0 446 55.2
Medtr7g024140 Medicago truncatula HOM05D005674 ORTHO05D007015 1.8e-44 184.5 449 83.3
Lj3g0025693 Lotus japonicus HOM05D005674 ORTHO05D007015 3.1e-36 157.1 449 80.4
Glyma.03G075500 Glycine max HOM05D005674 ORTHO05D007015 1.1e-33 148.7 447 78.7
arahy.Tifrunner.gnm1.ann1.U482D3 Arachis hypogaea HOM05D005674 ORTHO05D007015 2.0e-27 127.9 84 71.4
arahy.Tifrunner.gnm1.ann1.MAGV51 Arachis hypogaea HOM05D005674 ORTHO05D007015 7.6e-27 125.9 84 70.2
VMungo1309G1849 Vigna mungo HOM05D005674 ORTHO05D007015 7.6e-27 125.9 447 77.2
Lalb_Chr01g0007701 Lupinus albus HOM05D005674 ORTHO05D007015 2.2e-26 124.4 86 68.6
arahy.Tifrunner.gnm1.ann1.I145LQ Arachis hypogaea HOM05D005674 ORTHO05D007015 3.8e-26 123.6 80 71.2
arahy.Tifrunner.gnm1.ann1.JH6JIJ Arachis hypogaea HOM05D005674 ORTHO05D007015 5.4e-25 119.8 79 70.9
Phvul.009G126100 Phaseolus vulgaris HOM05D005674 ORTHO05D007015 1.2e-24 118.6 447 77.0
GSVIVG01024415001 Vitis vinifera HOM05D005674 ORTHO05D007015 4.6e-24 116.7 447 75.4
QL08p042254 Quercus lobata HOM05D005674 ORTHO05D007015 1.3e-23 115.2 80 67.5
Cfa012588 Carpinus fangiana HOM05D005674 ORTHO05D007015 2.1e-21 107.8 84 63.1
Migut.F00129 Erythranthe guttata HOM05D005674 ORTHO05D007015 4.8e-21 106.7 449 58.6
CAN.G1360.17 Capsicum annuum HOM05D001556 ORTHO05D001505 6.2e-21 106.3 195 59.0
ClCG07G002660 Citrullus lanatus HOM05D005674 ORTHO05D007015 8.1e-21 105.9 85 60.0
CsaV3_4G030900 Cucumis sativus L. HOM05D005674 ORTHO05D007015 8.1e-21 105.9 82 62.2
CSS0001557 Camellia sinensis var. sinensis HOM05D005674 ORTHO05D007015 1.8e-20 104.8 79 63.3
Sed0008626 Sechium edule HOM05D005674 ORTHO05D007015 6.9e-20 102.8 80 58.8
MD07G1055100 Malus domestica HOM05D005674 ORTHO05D007015 1.5e-19 101.7 85 58.8
MELO3C033809.2 Cucumis melo HOM05D005674 ORTHO05D007015 2.0e-19 101.3 74 63.5
Dinv12372 Davidia involucrata HOM05D005674 ORTHO05D007015 5.8e-19 99.8 77 61.0
Actinidia00858 Actinidia chinensis HOM05D005674 ORTHO05D007015 7.6e-19 99.4 81 60.5
CiPaw.03G192600 Carya illinoinensis HOM05D005674 ORTHO05D007015 7.6e-19 99.4 82 58.5
Manes.08G068200 Manihot esculenta HOM05D005674 ORTHO05D007015 7.6e-19 99.4 80 58.8
Cpa.g.sc90.66 Carica papaya HOM05D005674 ORTHO05D007015 9.9e-19 99.0 79 58.2
Lj1P677T28 Lonicera japonica HOM05D005674 ORTHO05D007015 9.9e-19 99.0 80 60.0
Ciclev10008244m.g Citrus clementina HOM05D005674 ORTHO05D007015 2.2e-18 97.8 82 54.9
MD15G1427800 Malus domestica HOM05D005674 ORTHO05D007015 2.9e-18 97.4 85 55.3
Sed0024338 Sechium edule HOM05D005674 ORTHO05D007015 2.9e-18 97.4 79 55.7
CsaV3_5G005440 Cucumis sativus L. HOM05D005674 ORTHO05D007015 3.8e-18 97.1 74 60.8
Manes.09G079700 Manihot esculenta HOM05D005674 ORTHO05D007015 3.8e-18 97.1 80 57.5
Rhsim04G0075800 Rhododendron simsii HOM05D005674 ORTHO05D007015 3.8e-18 97.1 80 58.8
Prupe.4G280300 Prunus persica HOM05D005674 ORTHO05D007015 4.9e-18 96.7 84 58.3
Sc04g0009990 Simmondsia chinensis HOM05D005674 ORTHO05D007015 4.9e-18 96.7 79 55.7
CANSAT54G2399 Cannabis sativa HOM05D005674 ORTHO05D007015 1.1e-17 95.5 76 57.9
Hma1.2p1_0067F.1_g036940 Hydrangea macrophylla HOM05D005674 ORTHO05D007015 1.1e-17 95.5 80 56.2
Prupe.3G114500 Prunus persica HOM05D005674 ORTHO05D007015 1.4e-17 95.1 84 57.1
PGSC0003DMG401020415 Solanum tuberosum HOM05D005674 ORTHO05D007015 3.2e-17 94.0 61 63.9
Lsat_1_v5_gn_3_116841 Lactuca sativa HOM05D005674 ORTHO05D007015 4.2e-17 93.6 80 53.8
Solyc07g055220.3 Solanum lycopersicum HOM05D005674 ORTHO05D007015 4.2e-17 93.6 61 62.3
Sopen07g027000 Solanum pennellii HOM05D005674 ORTHO05D007015 4.2e-17 93.6 61 62.3
CAN.G1360.18 Capsicum annuum HOM05D005674 ORTHO05D007015 5.4e-17 93.2 83 49.4
Duzib160G0406 Durio zibethinus HOM05D005674 ORTHO05D007015 5.4e-17 93.2 80 56.2
Solyc02g086230.2 Solanum lycopersicum HOM05D005674 ORTHO05D007015 5.4e-17 93.2 61 59.0
Sopen02g030910 Solanum pennellii HOM05D005674 ORTHO05D007015 5.4e-17 93.2 61 59.0
DCAR_018956 Daucus carota HOM05D005674 ORTHO05D007015 7.1e-17 92.8 81 50.6
Thecc.01G153300 Theobroma cacao HOM05D005674 ORTHO05D007015 7.1e-17 92.8 77 59.7
HanXRQChr13g0421081 Helianthus annuus HOM05D005674 ORTHO05D007015 1.2e-16 92.0 78 53.8
RcHm_v2.0_Chr2g0130841 Rosa chinensis HOM05D005674 ORTHO05D007015 1.6e-16 91.7 84 53.6
PGSC0003DMG400026386 Solanum tuberosum HOM05D005674 ORTHO05D007015 2.1e-16 91.3 61 55.7
TAR627G1060 Trochodendron aralioides HOM05D005674 ORTHO05D007015 2.7e-16 90.9 80 52.5
C02p47730 Brassica napus HOM05D005674 ORTHO05D007015 3.5e-16 90.5 166 57.2
BolC2t10809H Brassica oleracea HOM05D005674 ORTHO05D007015 3.5e-16 90.5 166 57.2
Atru.chr7.2335 Acer truncatum HOM05D005674 ORTHO05D007015 4.6e-16 90.1 82 51.2
Gohir.A13G157000 Gossypium hirsutum HOM05D005674 ORTHO05D007015 4.6e-16 90.1 83 50.6
Gohir.D10G254800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 4.6e-16 90.1 80 53.8
Potri.006G006500 Populus trichocarpa HOM05D005674 ORTHO05D007015 4.6e-16 90.1 61 62.3
Gorai.011G295800 Gossypium raimondii HOM05D005674 ORTHO05D007015 6.0e-16 89.7 80 52.5
Gorai.013G183800 Gossypium raimondii HOM05D005674 ORTHO05D007015 1.3e-15 88.6 79 53.2
Sabra06G0005200 Salix brachista HOM05D005674 ORTHO05D007015 1.3e-15 88.6 61 62.3
FvH4_6g27690 Fragaria vesca HOM05D005674 ORTHO05D007015 1.8e-15 88.2 83 49.4
Psat5g177920 Pisum sativum HOM05D005674 ORTHO05D007015 2.3e-15 87.8 54 74.1
A02p30210 Brassica napus HOM05D005674 ORTHO05D007015 3.0e-15 87.4 166 56.6
BraA02t08037Z Brassica rapa HOM05D005674 ORTHO05D007015 3.0e-15 87.4 166 56.6
Gohir.D13G161800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 3.0e-15 87.4 78 53.8
Hund00863 Selenicereus undatus HOM05D005674 ORTHO05D007015 3.0e-15 87.4 78 48.7
Gohir.A10G242800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 3.9e-15 87.0 79 53.2
Lalb_Chr19g0127261 Lupinus albus HOM05D005674 ORTHO05D007015 6.7e-15 86.3 165 35.2
TWI12G0566 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 8.7e-15 85.9 85 50.6
BcaC03g16871 Brassica carinata HOM05D005674 ORTHO05D007015 1.9e-14 84.7 61 57.4
Dinv11955 Davidia involucrata HOM05D005674 ORTHO05D007015 1.9e-14 84.7 72 55.6
Aqoxy3G02039 Aquilegia oxysepala HOM05D005674 ORTHO05D007015 2.5e-14 84.3 61 63.9
SalBow4G2062 Salvia bowleyana HOM05D005674 ORTHO05D007015 2.5e-14 84.3 61 55.7
AL8G11670 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 3.3e-14 84.0 166 56.0
PGR142G3640 Punica granatum HOM05D005674 ORTHO05D007015 3.3e-14 84.0 59 54.2
MELO3C020050.2 Cucumis melo HOM05D005674 ORTHO05D007015 5.6e-14 83.2 61 55.7
Sp2g11490 Schrenkiella parvula HOM05D005674 ORTHO05D007015 5.6e-14 83.2 61 57.4
AT5G46680 Arabidopsis thaliana HOM05D005674 ORTHO05D007015 7.4e-14 82.8 166 56.0
BcaC06g33618 Brassica carinata HOM05D005674 ORTHO05D007015 7.4e-14 82.8 83 44.6
Duzib116G0841 Durio zibethinus HOM05D005674 ORTHO05D007015 7.4e-14 82.8 61 54.1
ECA240G0139 Erigeron canadensis HOM05D005674 ORTHO05D007015 7.4e-14 82.8 81 46.9
Cc05_g08520 Coffea canephora HOM05D005674 ORTHO05D007015 9.6e-14 82.4 80 51.2
TWI31G0445 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 9.6e-14 82.4 81 49.4
CAN.G625.40 Capsicum annuum HOM05D005674 ORTHO05D007015 1.3e-13 82.0 78 50.0
CARHR224650 Cardamine hirsuta HOM05D005674 ORTHO05D007015 1.3e-13 82.0 79 48.1
SGA_v2.0_scaffold18G08491 Striga asiatica HOM05D005674 ORTHO05D007015 2.8e-13 80.9 78 47.4
MBI15_g37633_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 4.8e-13 80.1 80 47.5
Thhalv10001221m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 6.2e-13 79.7 61 54.1
Thhalv10025145m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 6.2e-13 79.7 79 45.6
Nitab4.5_0007923g0040 Nicotiana tabacum HOM05D005674 ORTHO05D007015 6.2e-13 79.7 82 45.1
Eucgr.K01145 Eucalyptus grandis HOM05D005674 ORTHO05D007015 8.1e-13 79.3 61 52.5
CARHR174820 Cardamine hirsuta HOM05D005674 ORTHO05D007015 1.1e-12 79.0 166 54.2
Carub.0008s0124 Capsella rubella HOM05D005674 ORTHO05D007015 4.0e-12 77.0 81 45.7
AUR62024049 Chenopodium quinoa HOM05D005674 ORTHO05D007015 4.0e-12 77.0 73 47.9
AUR62040438 Chenopodium quinoa HOM05D005674 ORTHO05D007015 4.0e-12 77.0 72 48.6
PSO063G6562 Papaver somniferum HOM05D005674 ORTHO05D007015 5.3e-12 76.6 81 45.7
PSO782G5737 Papaver somniferum HOM05D005674 ORTHO05D007015 5.3e-12 76.6 81 45.7
Peaxi162Scf00888g00007 Petunia axillaris HOM05D005674 ORTHO05D007015 5.3e-12 76.6 175 53.7
Psat0s3054g0080 Pisum sativum HOM05D005674 ORTHO05D007015 9.0e-12 75.9 41 82.9
THA.LOC104806715 Tarenaya hassleriana HOM05D005674 ORTHO05D007015 2.0e-11 74.7 175 53.1
BolC7t45434H Brassica oleracea HOM05D005674 ORTHO05D007015 3.4e-11 73.9 78 43.6
Nitab4.5_0000249g0090 Nicotiana tabacum HOM05D005674 ORTHO05D007015 5.8e-11 73.2 77 45.5
Aa31LG10G3050 Aethionema arabicum HOM05D005674 ORTHO05D007015 7.6e-11 72.8 79 43.0
HPP92_017208 Vanilla planifolia HOM05D005674 ORTHO05D007015 1.3e-10 72.0 69 47.8
COL.COLO4_33609 Corchorus olitorius HOM05D005674 ORTHO05D007015 2.2e-10 71.2 77 46.8
A03p50860 Brassica napus HOM05D005674 ORTHO05D007015 2.9e-10 70.9 73 45.2
BraA03t14173Z Brassica rapa HOM05D005674 ORTHO05D007015 2.9e-10 70.9 73 45.2
Nn2g12528 Nelumbo nucifera HOM05D005674 ORTHO05D007015 4.9e-10 70.1 77 45.5
C07p49250 Brassica napus HOM05D005674 ORTHO05D007015 6.5e-10 69.7 74 44.6
Os02g0793200 Oryza sativa ssp. japonica HOM05D005674 ORTHO05D007015 1.4e-09 68.6 74 47.3
AL7G36590 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 3.2e-09 67.4 68 47.1
Carub.0007s2342 Capsella rubella HOM05D005674 ORTHO05D007015 7.1e-09 66.2 69 44.9
Sp7g16190 Schrenkiella parvula HOM05D005674 ORTHO05D007015 7.1e-09 66.2 70 44.3
Zm00001eb201010 Zea mays HOM05D005674 ORTHO05D007015 7.1e-09 66.2 73 45.2
FAN23G2012 Fragaria x ananassa HOM05D005674 ORTHO05D007015 9.3e-09 65.9 49 55.1
Aa31LG6G670 Aethionema arabicum HOM05D005674 ORTHO05D007015 1.2e-08 65.5 76 40.8
TAR626G0412 Trochodendron aralioides HOM05D005674 ORTHO05D007015 1.2e-08 65.5 80 42.5
CsaV3_5G013070 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.6e-08 65.1 45 55.6
CsaV3_UNG017130 Cucumis sativus L. HOM05D005674 ORTHO05D007015 1.6e-08 65.1 45 55.6
Nitab4.5_0000753g0050 Nicotiana tabacum HOM05D005674 ORTHO05D007015 1.6e-08 65.1 77 41.6
Nitab4.5_0007990g0010 Nicotiana tabacum HOM05D005674 ORTHO05D007015 5.1e-07 60.1 73 41.1
Lalb_Chr01g0013691 Lupinus albus HOM05D001514 ORTHO05D007015 1.9e-06 58.2 44 61.4
Lalb_Chr06g0171701 Lupinus albus HOM05D005674 ORTHO05D007015 4.3e-06 57.0 44 61.4
MELO3C033079.2 Cucumis melo HOM05D005674 ORTHO05D031076 5.7e-06 56.6 39 59.0
Lalb_Chr02g0154491 Lupinus albus HOM05D005674 ORTHO05D007015 5.7e-06 56.6 37 64.9


User provided reference genes

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