Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.8e-63 245.7 122 100.0
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 3.9e-58 228.0 120 92.5
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 2.4e-44 182.2 124 76.6
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 3.9e-42 174.9 124 74.2
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 4.3e-41 171.4 124 72.6
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 9.5e-41 170.2 93 91.4
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 6.2e-40 167.5 125 72.0
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 1.7e-37 159.5 124 66.9
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 2.9e-37 158.7 124 66.9
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 2.9e-37 158.7 124 66.9
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 8.3e-37 157.1 124 66.1
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 5.4e-36 154.5 124 65.3
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 2.1e-32 142.5 124 63.7
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 1.2e-30 136.7 114 63.2
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.5e-30 136.3 114 63.2
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 3.4e-30 135.2 114 63.2
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.9e-25 119.4 115 56.5
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 7.3e-25 117.5 125 52.8
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 7.3e-25 117.5 125 52.8
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 1.3e-24 116.7 115 55.7
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.6e-24 116.3 127 48.8
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 2.8e-24 115.5 127 48.8
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 4.8e-24 114.8 124 50.0
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 2.4e-23 112.5 114 55.3
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 1.2e-22 110.2 124 50.0
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 2.6e-22 109.0 104 55.8
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 3.4e-22 108.6 124 49.2
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 5.8e-22 107.8 125 47.2
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 9.9e-22 107.1 105 57.1
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.3e-21 106.7 124 50.0
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 1.7e-21 106.3 123 47.2
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 2.2e-21 105.9 105 53.3
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 2.9e-21 105.5 114 50.0
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 8.4e-21 104.0 124 49.2
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 8.4e-21 104.0 104 53.8
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.4e-20 103.2 124 48.4
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 7.1e-20 100.9 106 50.0
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 9.3e-20 100.5 104 51.9
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 2.7e-19 99.0 105 52.4
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 2.7e-19 99.0 124 46.0
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 3.5e-19 98.6 124 46.0
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 3.5e-19 98.6 104 51.9
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 3.5e-19 98.6 104 51.9
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 6.0e-19 97.8 124 45.2
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 6.0e-19 97.8 105 49.5
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 6.0e-19 97.8 105 47.6
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.0e-18 97.1 114 48.2
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.0e-18 97.1 114 48.2
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 1.0e-18 97.1 105 53.3
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.3e-18 96.7 111 45.0
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 1.3e-18 96.7 123 46.3
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.7e-18 96.3 99 52.5
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.7e-18 96.3 105 47.6
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 3.0e-18 95.5 104 50.0
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.0e-18 95.5 125 41.6
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.9e-18 95.1 111 44.1
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 3.9e-18 95.1 105 47.6
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 3.9e-18 95.1 114 47.4
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 5.1e-18 94.7 124 41.9
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 5.1e-18 94.7 114 48.2
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 8.7e-18 94.0 104 46.2
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 1.5e-17 93.2 111 45.9
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.9e-17 92.8 102 52.0
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 2.5e-17 92.4 111 46.8
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 3.3e-17 92.0 103 51.5
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 5.6e-17 91.3 118 42.4
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 5.6e-17 91.3 104 47.1
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 7.3e-17 90.9 118 44.9
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 9.6e-17 90.5 124 44.4
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 1.6e-16 89.7 101 46.5
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 2.8e-16 89.0 101 46.5
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 2.8e-16 89.0 123 41.5
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 2.8e-16 89.0 125 39.2
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 3.6e-16 88.6 125 40.0
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 4.8e-16 88.2 103 49.5
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 4.8e-16 88.2 125 38.4
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 4.8e-16 88.2 125 38.4
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 8.1e-16 87.4 101 45.5
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 8.1e-16 87.4 101 45.5
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 8.1e-16 87.4 101 47.5
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 1.1e-15 87.0 125 38.4
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 1.4e-15 86.7 100 46.0
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 1.8e-15 86.3 125 41.6
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 2.4e-15 85.9 104 50.0
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 3.1e-15 85.5 111 42.3
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 3.1e-15 85.5 103 43.7
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 3.1e-15 85.5 100 45.0
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 4.0e-15 85.1 101 44.6
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 4.0e-15 85.1 101 46.5
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 6.9e-15 84.3 101 46.5
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 6.9e-15 84.3 99 46.5
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 9.0e-15 84.0 111 41.4
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 9.0e-15 84.0 111 42.3
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 1.2e-14 83.6 109 45.0
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 3.4e-14 82.0 106 48.1
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 5.8e-14 81.3 103 42.7
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 7.6e-14 80.9 99 45.5
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.9e-13 79.0 124 41.1
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 3.8e-13 78.6 107 40.2
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 6.4e-13 77.8 105 37.1
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 1.9e-12 76.3 104 43.3
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.9e-12 76.3 124 41.1
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 7.9e-11 70.9 99 39.4
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.0e-10 68.9 99 39.4
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 5.1e-10 68.2 106 34.9
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 6.7e-10 67.8 74 50.0
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 6.7e-10 67.8 99 39.4
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 1.5e-09 66.6 115 40.0
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 3.3e-09 65.5 99 37.4
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.3e-09 65.5 99 37.4
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 4.3e-09 65.1 99 37.4
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 3.7e-08 62.0 104 34.6
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 3.1e-07 58.9 112 36.6
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 4.5e-06 55.1 131 31.3


User provided reference genes

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