Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 2.6e-214 748.4 375 100.0
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 5.9e-182 641.0 382 86.6
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 4.7e-171 604.7 391 81.3
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.4e-154 550.1 296 90.9
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 3.1e-151 538.9 382 71.5
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.2e-150 537.0 377 71.6
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.3e-149 533.5 384 70.3
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.7e-149 533.1 377 70.0
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 2.9e-149 532.3 377 69.8
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 9.4e-148 527.3 380 71.8
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.7e-147 525.8 377 71.6
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 3.6e-147 525.4 383 69.5
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 3.0e-146 522.3 376 69.4
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 8.8e-146 520.8 386 68.7
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 8.8e-146 520.8 388 68.3
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 8.8e-146 520.8 381 69.3
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.5e-145 520.0 386 69.2
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.6e-145 519.2 387 70.0
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.6e-145 519.2 387 70.0
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.6e-145 519.2 386 68.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 5.7e-145 518.1 377 70.0
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 7.5e-145 517.7 392 66.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.3e-144 516.9 389 68.6
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.3e-144 516.9 379 70.4
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.2e-144 516.2 384 70.1
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 2.8e-144 515.8 379 68.3
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 6.3e-144 514.6 385 69.6
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 8.3e-144 514.2 383 66.6
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 8.3e-144 514.2 389 67.1
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 8.3e-144 514.2 383 68.4
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.4e-143 513.5 392 67.6
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.8e-143 513.1 380 68.9
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.8e-143 513.1 380 68.9
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.8e-143 513.1 384 68.8
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 3.1e-143 512.3 385 67.8
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 3.1e-143 512.3 382 68.3
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 4.1e-143 511.9 375 69.3
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 4.1e-143 511.9 375 68.8
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.1e-143 511.9 375 68.8
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.4e-143 511.5 376 68.6
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 7.0e-143 511.1 390 66.2
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 7.0e-143 511.1 390 66.4
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 9.1e-143 510.8 381 67.7
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.1e-143 510.8 376 68.6
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 1.2e-142 510.4 398 65.3
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.2e-142 510.4 383 67.4
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.0e-142 509.6 376 68.4
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 2.0e-142 509.6 386 66.6
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 2.7e-142 509.2 379 68.1
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.7e-142 509.2 380 67.6
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 2.7e-142 509.2 376 67.0
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 7.7e-142 507.7 383 67.1
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 1.3e-141 506.9 383 65.5
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.3e-141 506.9 395 66.6
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.3e-141 506.1 382 67.3
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 3.8e-141 505.4 381 67.5
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.8e-141 505.4 379 68.1
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.0e-141 505.0 379 67.3
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 6.6e-141 504.6 378 69.0
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.5e-140 502.7 381 66.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.5e-140 502.7 383 67.4
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 4.2e-140 501.9 384 67.7
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 9.5e-140 500.7 384 67.2
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.8e-139 499.2 381 67.2
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 2.8e-139 499.2 380 66.6
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 3.6e-139 498.8 396 65.2
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.4e-138 496.9 375 67.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.0e-138 495.7 385 66.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 3.0e-138 495.7 347 70.6
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 6.8e-138 494.6 347 70.6
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 8.9e-138 494.2 379 66.2
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 8.9e-138 494.2 378 67.2
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.0e-137 493.0 375 67.2
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 4.4e-137 491.9 347 70.0
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 5.7e-137 491.5 393 63.9
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.3e-136 490.3 387 65.1
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.7e-136 490.0 297 77.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.7e-136 488.8 378 65.9
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 4.9e-136 488.4 390 63.6
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 8.3e-136 487.6 459 58.6
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.4e-135 486.1 384 65.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 1.2e-134 483.8 435 60.2
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.8e-130 469.9 281 77.9
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 4.4e-129 465.3 377 63.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.3e-128 463.8 491 53.6
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 3.7e-128 462.2 376 63.8
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 4.1e-127 458.8 375 60.5
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.0e-125 452.6 299 72.9
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.6e-123 445.7 379 61.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 8.0e-123 444.5 304 67.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 6.8e-122 441.4 387 60.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 1.2e-121 440.7 422 56.6
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 7.8e-118 427.9 384 58.6
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-117 426.4 390 57.9
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.9e-116 423.3 387 58.1
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 5.8e-113 411.8 213 95.8
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 1.7e-112 410.2 364 60.4
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.2e-103 379.4 376 56.1
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 4.3e-100 369.0 317 61.8
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 9.0e-98 361.3 223 76.7
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 5.8e-97 358.6 318 56.6
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 3.2e-95 352.8 362 52.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 9.3e-95 351.3 319 54.5
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.2e-94 350.9 230 78.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 2.5e-92 343.2 213 76.1
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.5e-92 343.2 213 76.1
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 2.5e-92 343.2 213 76.1
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.4e-90 336.7 234 64.5
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 2.9e-88 329.7 330 50.6
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 5.1e-85 318.9 244 64.3
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.1e-79 301.2 291 48.5
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.6e-75 287.3 292 54.8
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.1e-68 264.6 304 42.4
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 9.7e-68 261.5 285 45.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.1e-63 248.1 278 46.0
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.9e-63 247.3 177 67.8
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.2e-59 233.8 157 73.2
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 2.6e-52 210.3 135 74.8
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.4e-37 161.4 167 56.9
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 1.5e-36 157.9 161 49.7
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.0e-32 145.2 167 48.5
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 5.5e-31 139.4 101 73.3
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 1.6e-30 137.9 95 66.3
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 4.7e-30 136.3 108 63.0
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 3.7e-27 126.7 64 90.6
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.3e-24 117.5 169 43.2
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 6.6e-24 115.9 87 64.4
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 3.9e-16 90.1 47 83.0
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 3.9e-16 90.1 47 83.0
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 7.3e-07 59.3 43 62.8


User provided reference genes

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